Gene omics information

Query gene ID PtpAffx.202202.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.202202.1.S1_x_atpmrna4400hypothetical protein-1e+0At5g44920Toll-Interleukin-Resistance (TIR) domain-containing proteinS.X.H.G.
0.5582.2Ptp.4036.1.S1_atCV282873hypothetical protein-4e-8At2g41430ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15)S.X.H.G.
0.4067.0Ptp.3180.1.S1_x_atCV256657hypothetical protein-3e-15At1g35720ANNAT1 (ANNEXIN ARABIDOPSIS 1)S.X.H.G.
0.4067.0Ptp.7652.1.S1_s_atCV270972hypothetical protein-7e-80At5g01960zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2645.2PtpAffx.92678.3.S1_atCV245734hypothetical protein-1e-6At1g76140serine-type endopeptidase/ serine-type peptidaseS.X.H.G.
0.2238.3PtpAffx.88343.1.S1_atCV271081--1e-11At5g06370NC domain-containing proteinS.X.H.G.
0.1118.1PtpAffx.88497.2.A1_a_atBU879234hypothetical protein-7e-2At5g45940atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11)S.X.H.G.
0.0812.9PtpAffx.9921.1.A1_a_atCV242822histone ubiquitination proteins group-6e-85At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.399.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
7.498.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.097.5GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
4.495.9GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
4.395.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.001e-96351PtpAffx.202202.1.S1_atpmrna4400hypothetical protein-1e+0At5g44920Toll-Interleukin-Resistance (TIR) domain-containing proteinC.G.S.X.
0.072e-1271PtpAffx.204720.1.S1_atpmrna9301hypothetical protein-4e-46At1g49890unknown proteinC.G.S.X.
0.118e-1269PtpAffx.201181.1.S1_atpmrna2341hypothetical protein-9e-41At3g19570unknown proteinC.G.S.X.
0.024e-134PtpAffx.223418.1.S1_atpmrna41411hypothetical protein-1e-2At5g33370GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.024e-134PtpAffx.217889.1.S1_atpmrna33337hypothetical protein-9e-1At5g15550transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.034e-134PtpAffx.216164.1.S1_atpmrna30778hypothetical protein-2e+0At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.034e-134PtpAffx.215509.1.S1_atpmrna29747hypothetical protein-2e+0At3g01472CPuORF33 (Conserved peptide upstream open reading frame 33)C.G.S.X.
0.032e+032PtpAffx.76428.1.S1_atCV283917--1e-53At5g35570unknown proteinC.G.S.X.
0.032e+032PtpAffx.70125.1.S1_s_atCV231195hypothetical protein-1e-4At5g08695nucleic acid binding / nucleotide bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+032Arabidopsis thalianaAt5g44920834522Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBO---C.G.S.X.
0.064e-134Glycine maxHgAffx.3842.1.S1_atCK348848--1e+1At4g20690unknown proteinC.G.S.X.
0.056e-132Hordeum vulgareContig5554_atContig5554--3e+0At5g26620unknown proteinC.G.S.X.
0.043e+032Oryza sativaOs07g0116400NM_194150.1--1e+0At4g04985aspartic-type endopeptidaseC.G.S.X.
0.075e+030Triticum aestivumTaAffx.86663.1.S1_atCA603435--5e-1At3g44020thylakoid lumenal P17.1 proteinC.G.S.X.
0.051e-134Vitis vinifera1607836_atCF211628--1e+0At5g07890myosin heavy chain-relatedC.G.S.X.
0.042e+030Zea maysZm.16860.1.A1_atCF648633--4e-4At1g79750ATNADP-ME4 (NADP-malic enzyme 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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