Gene omics information

Query gene ID PtpAffx.201843.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8697.4PtpAffx.201843.1.S1_atpmrna3668hypothetical protein-2e-55At1g77280protein kinase family proteinS.X.H.G.
0.3661.6PtpAffx.16409.1.A1_atDN495749hypothetical protein-6e-6At5g59740UDP-galactose/UDP-glucose transporter-relatedS.X.H.G.
0.3458.3PtpAffx.150562.1.S1_atCV270374hypothetical protein-2e-5At5g49540unknown proteinS.X.H.G.
0.3153.7Ptp.438.1.S1_atCK317792hypothetical protein-2e-18At5g40550unknown proteinS.X.H.G.
0.3153.7PtpAffx.74269.1.S1_atBP934375f-box family protein-5e+0At3g02870VTC4S.X.H.G.
0.2950.5Ptp.3674.1.S1_s_atDN490653hypothetical protein-1e-85At4g12590unknown proteinS.X.H.G.
0.2950.5PtpAffx.5179.2.A1_a_atCV254168hypothetical protein-1e-10At3g58670unknown proteinS.X.H.G.
0.2645.2PtpAffx.74515.1.A1_atCX659834hypothetical protein-2e-21At5g05310unknown proteinS.X.H.G.
0.2543.6PtpAffx.220137.1.S1_atpmrna36484hypothetical protein-3e-18At5g07630lipid transporterS.X.H.G.
0.2340.5PtpAffx.30680.1.A1_atCV264945hypothetical protein-3e-4At1g04190tetratricopeptide repeat (TPR)-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.298.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.796.3GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6701844PtpAffx.1232.1.A1_atCV238234hypothetical protein-3e-37At1g77280protein kinase family proteinC.G.S.X.
0.252e-108395PtpAffx.126720.1.S1_s_atCX172039hypothetical protein-2e-18At1g77280protein kinase family proteinC.G.S.X.
0.022e-656PtpAffx.22505.1.S1_atDN498843hypothetical protein-4e+0At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedC.G.S.X.
0.015e-448PtpAffx.224980.1.S1_atpmrna43941hypothetical protein-3e-2At1g66930serine/threonine protein kinase family proteinC.G.S.X.
0.062e-346PtpAffx.36904.1.A1_atCV273991hypothetical protein-4e-4At4g35030protein kinase family proteinC.G.S.X.
0.052e-346PtpAffx.224428.1.S1_atpmrna42946hypothetical protein-7e-3At1g21590protein kinase family proteinC.G.S.X.
0.027e-344PtpAffx.210936.1.S1_atpmrna21491hypothetical protein-2e-2At1g11050protein kinase family proteinC.G.S.X.
0.017e-344PtpAffx.200654.1.S1_atpmrna1271hypothetical protein-3e-34At1g51940protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinC.G.S.X.
0.123e-242PtpAffx.49441.1.A1_atCV236474hypothetical protein-5e-10At5g63940protein kinase family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.222e-55218Arabidopsis thalianaAt1g77280844064protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA---C.G.S.X.
0.242e-40169Glycine maxGmaAffx.30248.1.S1_atAW458376--1e-9At1g77280protein kinase family proteinC.G.S.X.
0.016e-136Hordeum vulgareContig12842_atContig12842--5e+0Atmg00740-C.G.S.X.
0.041e-1173Oryza sativaOs11g0194900AK072656.1-Protein kinase domain containing protein3e-10At1g77280protein kinase family proteinC.G.S.X.
0.051e-1689Triticum aestivumTa.6827.2.S1_atBQ841853--4e-1At3g05140RBK2 (Rop Binding protein Kinases 2)C.G.S.X.
0.074e-756Vitis vinifera1616053_atCF403274hypothetical protein LOC100243137-2e-1At1g63140O-methyltransferase, putativeC.G.S.X.
0.029e-342Zea maysZmAffx.914.1.A1_atAI770970--2e-20At5g13160PBS1 (avrPphB susceptible 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage