Gene omics information

Query gene ID PtpAffx.201518.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0PtpAffx.201518.1.S1_atpmrna2994hypothetical protein-2e-1At2g42940DNA-binding family proteinS.X.H.G.
0.9199.2PtpAffx.58064.1.S1_atCF234724f-box family protein-1e-16At4g24060Dof-type zinc finger domain-containing proteinS.X.H.G.
0.8096.0PtpAffx.90771.1.A1_atCK092819f-box family protein-3e-1At4g24060Dof-type zinc finger domain-containing proteinS.X.H.G.
0.7393.6Ptp.5552.1.S1_s_atAI161787hypothetical protein-4e-1At1g66070translation initiation factor-relatedS.X.H.G.
0.5784.2PtpAffx.16980.1.A1_atCK095992hypothetical protein-5e+0At3g02310SEP2 (SEPALLATA 2)S.X.H.G.
0.2950.5PtpAffx.81247.1.S1_s_atCV267779hypothetical protein-2e+0At3g62580-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.099.6GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
11.699.2GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
10.999.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
9.598.8GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
7.098.0GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
6.097.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
5.396.9GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.903e-177621PtpAffx.205903.1.S1_atpmrna11702hypothetical protein-4e-9At3g04570DNA-binding protein-relatedC.G.S.X.
0.276e-961PtpAffx.222504.1.S1_s_atpmrna39980hypothetical protein-2e-2At4g35390AGF1 (AT-hook protein of GA feedback 1)C.G.S.X.
0.102e-859PtpAffx.211007.1.S1_atpmrna21629hypothetical protein-1e-5At3g04570DNA-binding protein-relatedC.G.S.X.
0.049e-857PtpAffx.220048.1.S1_atpmrna36320hypothetical protein-7e-7At2g35270DNA-binding protein-relatedC.G.S.X.
0.148e-548PtpAffx.209324.1.S1_atpmrna18438hypothetical protein-3e-10At3g55560AGF2 (AT-hook protein of GA feedback 2)C.G.S.X.
0.128e-548PtpAffx.162571.1.A1_atCV253632--3e-12At4g14465DNA-binding protein-relatedC.G.S.X.
0.078e-238PtpAffx.207720.1.S1_x_atpmrna15337hypothetical protein-2e-4At3g55560AGF2 (AT-hook protein of GA feedback 2)C.G.S.X.
0.078e-238PtpAffx.207720.1.S1_atpmrna15337hypothetical protein-2e-4At3g55560AGF2 (AT-hook protein of GA feedback 2)C.G.S.X.
0.043e-136PtpAffx.64868.1.S1_atCK094921--5e+0At4g01680MYB55 (myb domain protein 55)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-136Arabidopsis thalianaAt2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBO---C.G.S.X.
0.091e-344Glycine maxGma.2112.1.S1_atAW309814--3e-2At4g22810DNA-binding protein-relatedC.G.S.X.
0.041e-136Hordeum vulgareContig4556_atContig4556--1e+0At1g02750zinc ion bindingC.G.S.X.
0.065e-446Oryza sativaOsAffx.15547.1.S1_at---0C.G.S.X.
0.099e-134Triticum aestivumTaAffx.112788.1.S1_atCA620934--8e-1At1g20900ESC (ESCAROLA)C.G.S.X.
0.151e-1891Vitis vinifera1621103_atCB003423--2e-12At3g04570DNA-binding protein-relatedC.G.S.X.
0.022e+032Zea maysZm.17090.1.S1_atAW155707transferase, transferring glycosyl groups-2e-4At2g20810GAUT10 (GALACTURONOSYLTRANSFERASE 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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