Gene omics information

Query gene ID PtpAffx.201188.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9399.5PtpAffx.201188.1.S1_atpmrna2352hypothetical protein-7e-8At3g19610unknown proteinS.X.H.G.
0.6588.6PtpAffx.201118.1.S1_atpmrna2202hypothetical protein-3e-8At5g09430hydrolaseS.X.H.G.
0.5884.2PtpAffx.125735.1.A1_atDN491719--7e-9At1g79640ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseS.X.H.G.
0.5683.9PtpAffx.43630.1.A1_atCV264054--2e+0At5g16650DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.5582.2PtpAffx.224559.1.S1_atpmrna43206hypothetical protein-7e-11At1g22130AGL104 (AGAMOUS-LIKE 104)S.X.H.G.
0.5279.4PtpAffx.202083.1.S1_atpmrna4151hypothetical protein-6e-32At2g26490transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.5178.9PtpAffx.206203.1.S1_atpmrna12320hypothetical protein-4e-9At5g35390leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.5178.9PtpAffx.201517.1.S1_atpmrna2990hypothetical protein-3e-9At1g20925auxin efflux carrier family proteinS.X.H.G.
0.4975.7PtpAffx.214319.1.S1_atpmrna27849hypothetical protein-3e-15At5g19610sec7 domain-containing proteinS.X.H.G.
0.4975.7PtpAffx.30582.1.A1_atCV260804hypothetical protein-6e-19At3g03900adenylylsulfate kinase, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.299.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
15.499.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
15.499.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
12.399.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
11.999.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
11.399.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
0.459.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.355.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
0.355.0GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
0.249.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-138PtpAffx.205494.1.S1_atpmrna10861hypothetical protein-3e-1At5g48920TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)C.G.S.X.
0.014e-138PtpAffx.202240.1.S1_atpmrna4491hypothetical protein-3e-17At4g01210transferase, transferring glycosyl groupsC.G.S.X.
0.014e-138PtpAffx.201220.1.S1_atpmrna2424hypothetical protein-2e+0At5g09630protein binding / zinc ion bindingC.G.S.X.
0.014e-138PtpAffx.201220.1.S1_s_atpmrna2424hypothetical protein-2e+0At5g09630protein binding / zinc ion bindingC.G.S.X.
0.011e+036PtpAffx.70992.1.S1_a_atAF263611.1polyphenol oxidase-1e+0At4g12600ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinC.G.S.X.
0.011e+036PtpAffx.218118.1.S1_atpmrna33646hypothetical protein-4e-1At5g41560-C.G.S.X.
0.011e+036PtpAffx.214184.1.S1_atpmrna27591hypothetical protein-7e-30At2g25600SPIK (Shaker Pollen Inward K+ channel)C.G.S.X.
0.011e+036PtpAffx.213268.1.S1_x_atpmrna25951hypothetical protein-3e-22At3g10230LYC (LYCOPENE CYCLASE)C.G.S.X.
0.011e+036PtpAffx.213268.1.S1_s_atpmrna25951hypothetical protein-3e-22At3g10230LYC (LYCOPENE CYCLASE)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-859Arabidopsis thalianaAt3g19610821498unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBF---C.G.S.X.
0.024e-138Glycine maxGma.6151.1.S1_atBQ611806--1e+0At5g05410DREB2AC.G.S.X.
0.015e-136Hordeum vulgareContig10410_atContig10410--1e+0At2g17305-C.G.S.X.
0.015e-448Oryza sativaOs08g0541500AK120995.1-Plant protein of unknown function DUF936 familyprotein4e-1At1g08760unknown proteinC.G.S.X.
0.021e+036Triticum aestivumTa.1106.2.S1_atBG904448--2e-1At1g67265RTFL21 (ROTUNDIFOLIA LIKE 21)C.G.S.X.
0.021e+034Vitis vinifera1617246_s_atCF514982similar to 40S ribosomal S4 protein-5e-94At5g0709040S ribosomal protein S4 (RPS4B)C.G.S.X.
0.012e+034Zea maysZm.14129.2.S1_atAI677373--3e-19At5g2806040S ribosomal protein S24 (RPS24B)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage