Gene omics information

Query gene ID PtpAffx.201013.1.S1_at
Gene name lysine/histidine transporter
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.201013.1.S1_atpmrna1989lysine/histidine transporter-1e-21At5g40780LHT1S.X.H.G.
0.6791.1PtpAffx.23587.2.A1_a_atCV253516NAC domain protein, IPR003441-4e-4At2g33480ANAC041 (Arabidopsis NAC domain containing protein 41)S.X.H.G.
0.5582.2PtpAffx.210577.1.S1_atpmrna20746hypothetical protein-4e-32At3g48195phox (PX) domain-containing proteinS.X.H.G.
0.4067.0PtpAffx.1257.2.A1_atCV236343hypothetical protein-6e-34At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinS.X.H.G.
0.3863.7PtpAffx.102994.1.S1_atCV266619hypothetical protein-9e-24At1g07510ftsh10 (FtsH protease 10)S.X.H.G.
0.2950.5PtpAffx.204768.1.S1_atpmrna9390hypothetical protein-7e-14At5g09620octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinS.X.H.G.
0.2850.5PtpAffx.28713.1.A1_atCV258396hypothetical protein-1e-5At4g12570UPL5 (UBIQUITIN PROTEIN LIGASE 5)S.X.H.G.
0.2850.5PtpAffx.201053.1.S1_atpmrna2074oligopeptide transporter OPT family-3e-103At3g27020YSL6 (YELLOW STRIPE LIKE 6)S.X.H.G.
0.2340.5PtpAffx.206232.1.S1_atpmrna12368hypothetical protein-9e-22At3g09470-S.X.H.G.
0.2238.3PtpAffx.8610.2.A1_atCV245541--5e-9At5g60410SIZ1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.298.1GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
5.997.4GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
5.296.8GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.896.4GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
4.696.2GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.794.7GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.590.9GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.540940PtpAffx.42238.1.A1_s_atBP933309lysine/histidine transporter-6e-6At1g48640lysine and histidine specific transporter, putativeC.G.S.X.
0.420763PtpAffx.152030.1.S1_atCA822109--2e-33At5g40780LHT1C.G.S.X.
0.420763PtpAffx.152030.1.S1_s_atCA822109lysine/histidine transporter-2e-33At5g40780LHT1C.G.S.X.
0.452e-51204PtpAffx.208626.1.S1_atpmrna17122lysine/histidine transporter-5e-20At5g40780LHT1C.G.S.X.
0.352e-42174PtpAffx.212850.1.S1_atpmrna25146lysine/histidine transporter-9e-28At5g40780LHT1C.G.S.X.
0.532e-42174PtpAffx.201014.1.S1_atpmrna1991lysine/histidine transporter-5e-17At1g67640lysine and histidine specific transporter, putativeC.G.S.X.
0.343e-32141PtpAffx.208250.1.S1_atpmrna16421lysine/histidine transporter-1e-14At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.162e-1895PtpAffx.208967.1.S1_s_atpmrna17773lysine/histidine transporter-1e-11At1g25530lysine and histidine specific transporter, putativeC.G.S.X.
0.023e-138PtpAffx.34085.1.A1_atBU876054--2e+0At3g48840nucleic acid binding / nucleotide bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.341e-21105Arabidopsis thalianaAt5g40780834078LHT1Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.---C.G.S.X.
0.244e-34147Glycine maxGmaAffx.46129.1.S1_atBI892562--5e-6At5g40780LHT1C.G.S.X.
0.024e-136Hordeum vulgareContig1830_atContig1830--6e-3At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)C.G.S.X.
0.174e-32141Oryza sativaOs08g0127100AK065217.1-Lysine and histidine specific transporter3e-19At5g40780LHT1C.G.S.X.
0.191e-1585Triticum aestivumTa.12339.1.S1_s_atBT009250.1--5e-15At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.381e-61236Vitis vinifera1617470_s_atBQ797931similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transmembrane transporter-6e-11At1g48640lysine and histidine specific transporter, putativeC.G.S.X.
0.142e-963Zea maysZm.17174.1.A1_atCO531239hypothetical protein LOC100273979-2e-6At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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