Gene omics information

Query gene ID PtpAffx.200992.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2PtpAffx.200992.1.S1_s_atpmrna1952hypothetical protein-7e-29At3g27400pectate lyase family proteinS.X.H.G.
0.6791.1PtpAffx.44563.1.A1_s_atCV253088hypothetical protein-4e-7At2g47500ATP binding / microtubule motorS.X.H.G.
0.5380.5PtpAffx.86423.1.S1_atCF232732multicopper oxidase-6e-6At5g66920sks17 (SKU5 Similar 17)S.X.H.G.
0.4471.9Ptp.6384.1.S1_a_atCV265840hypothetical protein-1e-19At1g46480WOX4 (WUSCHEL RELATED HOMEOBOX 4)S.X.H.G.
0.2747.1PtpAffx.208347.1.S1_atpmrna16595hypothetical protein-7e-32At3g21530endonuclease/exonuclease/phosphatase family proteinS.X.H.G.
0.2441.8Ptp.5491.1.S1_atCV268895hypothetical protein-3e+0At5g65580unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.4100.0GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
13.399.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
10.098.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
6.898.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
5.096.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.992.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
1.684.5GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
1.381.0GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6501334Ptp.4652.1.S1_s_atAI162963hypothetical protein-1e-4At3g27400pectate lyase family proteinC.G.S.X.
0.433e-44180PtpAffx.208266.1.S1_s_atpmrna16449hypothetical protein-9e-25At3g27400pectate lyase family proteinC.G.S.X.
0.242e-36155PtpAffx.36136.1.S1_atCX656299hypothetical protein-6e-69At5g63180pectate lyase family proteinC.G.S.X.
0.263e-32141Ptp.5677.1.S1_atAI165969hypothetical protein-3e-5At1g67750pectate lyase family proteinC.G.S.X.
0.082e-27125PtpAffx.211973.1.S1_atpmrna23517hypothetical protein-2e-40At3g24670pectate lyase family proteinC.G.S.X.
0.056e-27123PtpAffx.202640.1.S1_atpmrna5277hypothetical protein-2e-77At4g13710pectate lyase family proteinC.G.S.X.
0.202e-20101PtpAffx.50265.1.S1_s_atCV254295hypothetical protein-1e-10At3g24230pectate lyase family proteinC.G.S.X.
0.202e-20101PtpAffx.50265.1.S1_atCV254295hypothetical protein-1e-10At3g24230pectate lyase family proteinC.G.S.X.
0.105e-1893Ptp.4810.1.A1_s_atCK098630hypothetical protein-7e-37At3g07010pectate lyase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.317e-29129Arabidopsis thalianaAt3g27400822361pectate lyase family proteinF:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO---C.G.S.X.
0.331e-1895Glycine maxGma.1326.3.S1_atAI442263pectate lyase precursor-1e-47At4g24780pectate lyase family proteinC.G.S.X.
0.062e-1893Hordeum vulgareContig11004_atContig11004--3e-22At3g07010pectate lyase family proteinC.G.S.X.
0.072e-21105Oryza sativaOs04g0137100AK060609.1-Pectate lyase (Fragment)8e-6At3g07010pectate lyase family proteinC.G.S.X.
0.077e-2099Triticum aestivumTa.11160.1.S1_s_atBQ169530--5e-14At3g07010pectate lyase family proteinC.G.S.X.
0.573e-170597Vitis vinifera1607945_atAF243475.1pectate lyase-1e-39At1g67750pectate lyase family proteinC.G.S.X.
0.039e-238Zea maysZm.1359.1.S1_atL20139.1male gametophyte-specific2-3e-6At3g01270pectate lyase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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