Gene omics information

Query gene ID PtpAffx.200852.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.200852.1.S1_atpmrna1653hypothetical protein-2e-3At1g30370lipase class 3 family proteinS.X.H.G.
0.8096.0PtpAffx.86948.1.S1_s_atDN483659hypothetical protein-7e-2At3g05980unknown proteinS.X.H.G.
0.7192.6PtpAffx.86948.1.S1_atDN483659--7e-2At3g05980unknown proteinS.X.H.G.
0.6791.1PtpAffx.69940.1.A1_atCV238070--7e+0At5g11080ubiquitin family proteinS.X.H.G.
0.6791.1PtpAffx.142992.1.S1_s_atCA823082glycosyltransferase, CAZy family GT8-3e-4At1g70090LGT8 (GLUCOSYL TRANSFERASE FAMILY 8)S.X.H.G.
0.5582.2PtpAffx.85220.1.S1_atDN488269hypothetical protein-7e+0Atmg00120-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
44.0100.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
10.899.1GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.797.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8801308PtpAffx.204851.1.S1_atpmrna9585hypothetical protein-1e-5At1g30370lipase class 3 family proteinC.G.S.X.
0.012e-138PtpAffx.204445.1.S1_atpmrna8722--3e-8At3g43610tubulin bindingC.G.S.X.
0.018e-136PtpAffx.1258.4.S1_s_atCF232778actin 1 /// actin 9-0At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.013e+034PtpAffx.8880.1.S1_atCV278627hypothetical protein-3e-31At3g10410scpl49 (serine carboxypeptidase-like 49)C.G.S.X.
0.013e+034PtpAffx.217035.1.S1_atpmrna32151hypothetical protein-1e-7At1g72390unknown proteinC.G.S.X.
0.013e+034PtpAffx.217035.1.S1_x_atpmrna32151hypothetical protein-1e-7At1g72390unknown proteinC.G.S.X.
0.013e+034PtpAffx.217035.1.S1_s_atpmrna32151hypothetical protein-1e-7At1g72390unknown proteinC.G.S.X.
0.013e+034PtpAffx.213982.1.S1_atpmrna27246hypothetical protein-8e-1At2g14247Expressed proteinC.G.S.X.
0.013e+034PtpAffx.208803.1.S1_atpmrna17453hypothetical protein-1e-23At2g02820MYB88 (myb domain protein 88)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-344Arabidopsis thalianaAt1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMV---C.G.S.X.
0.028e-136Glycine maxPsAffx.C93000028_atPsAffx.C93000028--1e+0At1g28327-C.G.S.X.
0.024e+032Hordeum vulgareContig8526_atContig8526--5e-1At5g14430dehydration-responsive protein-relatedC.G.S.X.
0.024e+034Oryza sativaOs05g0349400AK107832.1-Hypothetical protein4e+0At5g65220ribosomal protein L29 family proteinC.G.S.X.
0.022e+034Triticum aestivumTaAffx.103048.1.S1_atCA600471--7e-2At3g03950protein bindingC.G.S.X.
0.023e+032Vitis vinifera1619816_atCA817914hypothetical protein LOC100250681-2e-11At1g75350emb2184 (embryo defective 2184)C.G.S.X.
0.022e-136Zea maysZm.17675.1.S1_atCK369796--1e+1At3g27250unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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