Gene omics information

Query gene ID PtpAffx.200695.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1PtpAffx.200695.1.S1_atpmrna1344hypothetical protein-6e-10At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinS.X.H.G.
0.8096.0PtpAffx.756.2.S1_a_atDN496305hypothetical protein-2e-6At2g16790shikimate kinase family proteinS.X.H.G.
0.5683.9Ptp.7355.1.S1_atCX174270hypothetical protein-3e-24At1g01710acyl-CoA thioesterase family proteinS.X.H.G.
0.5380.5PtpAffx.4971.2.S1_a_atCV252275hypothetical protein-3e-49At5g08160ATPK3S.X.H.G.
0.5279.4PtpAffx.5890.2.S1_atCF232083hypothetical protein-5e-3At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.5078.6Ptp.5653.1.S1_atCK110426hypothetical protein-6e-56At3g58040SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2)S.X.H.G.
0.4774.6Ptp.5648.1.A1_atCV230085hypothetical protein-1e-7At3g16480MPPalpha (mitochondrial processing peptidase alpha subunit)S.X.H.G.
0.4673.7Ptp.4857.2.S1_s_atCK095641hypothetical protein-2e-9At5g25360unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.697.9GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.697.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.196.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.494.0GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.293.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.992.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.313e-1273PtpAffx.221760.1.S1_atpmrna38805hypothetical protein-8e-1At1g64360unknown proteinC.G.S.X.
0.012e-138PtpAffx.225726.1.S1_atpmrna45293tir-nbs-lrr resistance protein-3e-2At1g56510WRR4 (WHITE RUST RESISTANCE 4)C.G.S.X.
0.023e+034PtpAffx.9816.1.S1_atDN488409--3e-1At5g05830zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.023e+034PtpAffx.24891.1.S1_atCV242457hypothetical protein-2e+0At4g35170-C.G.S.X.
0.023e+034PtpAffx.210539.1.S1_atpmrna20662hypothetical protein-2e-51At5g62600transportin-SR-relatedC.G.S.X.
0.023e+034PtpAffx.208598.1.S1_atpmrna17062hypothetical protein-7e-1At1g15860-C.G.S.X.
0.013e+034PtpAffx.206391.1.S1_x_atpmrna12701hypothetical protein-5e-9At4g29720ATPAO5 (Polyamine oxidase 5)C.G.S.X.
0.013e+034PtpAffx.206391.1.S1_atpmrna12701hypothetical protein-5e-9At4g29720ATPAO5 (Polyamine oxidase 5)C.G.S.X.
0.013e+034PtpAffx.206219.1.S1_s_atpmrna12347hypothetical protein-4e-98At5g53530VPS26A (VACUOLAR PROTEIN SORTING 26A)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.136e-1065Arabidopsis thalianaAt5g22140832275pyridine nucleotide-disulphide oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:plasma membrane;BOFAMP---C.G.S.X.
0.204e-21103Glycine maxGma.5129.1.S1_atCF920232--3e-12At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.081e-344Hordeum vulgareContig5496_atContig5496--3e-3At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.093e-757Oryza sativaOs02g0150300AK120153.1-FAD-dependent pyridine nucleotide-disulphideoxidoreductase domain containing protein5e+0At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.124e-550Triticum aestivumTa.1233.1.S1_atBT009021.1--1e-5At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.148e-1683Vitis vinifera1611145_atCF513038hypothetical protein LOC100263525-4e-9At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.024e-342Zea maysZm.4356.1.S1_atAY107334.1disulfide oxidoreductase/ electron carrier/ oxidoreductase-2e-1At2g23430ICK1C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage