Gene omics information

Query gene ID PtpAffx.200540.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.200540.1.S1_s_atpmrna1075hypothetical protein-2e-6At5g54570BGLU41 (BETA GLUCOSIDASE 41)S.X.H.G.
0.7393.6PtpAffx.92049.1.S1_s_atDN494710hypothetical protein-3e-7At5g54570BGLU41 (BETA GLUCOSIDASE 41)S.X.H.G.
0.6388.1PtpAffx.200541.1.S1_s_atpmrna1076hypothetical protein-3e-1At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)S.X.H.G.
0.6187.0PtpAffx.208897.1.S1_atpmrna17648hypothetical protein-1e+0At4g35360pantothenate kinase family proteinS.X.H.G.
0.6086.0PtpAffx.67985.1.S1_atBP933020--8e-1At2g21810CHP-rich zinc finger protein, putativeS.X.H.G.
0.3661.6PtpAffx.22767.1.S1_a_atDN487906hypothetical protein-8e+0At5g27940WPP3 (WPP domain protein 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.899.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
20.699.8GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
17.299.6GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
5.597.1GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
4.996.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.995.1GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.987.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7201687PtpAffx.200539.1.S1_atpmrna1074hypothetical protein-1e-5At3g09260PYK10C.G.S.X.
0.6901047PtpAffx.92049.1.S1_s_atDN494710hypothetical protein-3e-7At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.519e-99361PtpAffx.216821.1.S1_s_atpmrna31856hypothetical protein-3e-8At1g66280BGLU22C.G.S.X.
0.481e-79297PtpAffx.55714.1.S1_s_atCX177745hypothetical protein-9e-5At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.517e-38159PtpAffx.204078.1.S1_s_atpmrna8052hypothetical protein-4e-5At5g42260BGLU12 (BETA GLUCOSIDASE 12)C.G.S.X.
0.517e-38159PtpAffx.204078.1.S1_atpmrna8052hypothetical protein-4e-5At5g42260BGLU12 (BETA GLUCOSIDASE 12)C.G.S.X.
0.316e-35149PtpAffx.204075.1.S1_s_atpmrna8049hypothetical protein-8e-3At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.089e-25115PtpAffx.200541.1.S1_s_atpmrna1076hypothetical protein-3e-1At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)C.G.S.X.
0.112e-1067PtpAffx.200551.1.S1_atpmrna1094hypothetical protein-5e-8At3g60120BGLU27 (BETA GLUCOSIDASE 27)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-654Arabidopsis thalianaAt5g54570835545BGLU41 (BETA GLUCOSIDASE 41)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:plant-type cell wall;BOPMFA---C.G.S.X.
0.072e-138Glycine maxGmaAffx.74120.1.S1_atBI945865--2e-11At1g61810BGLU45 (BETA-GLUCOSIDASE 45)C.G.S.X.
0.044e+032Hordeum vulgareS0000800160B06F1_atS0000800160B06F1--1e-2At4g40040histone H3.2C.G.S.X.
0.054e-963Oryza sativaOs06g0683300AK068614.1-Beta-glucosidase1e-10At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.031e-138Triticum aestivumTa.9051.1.S1_a_atBJ269163--4e+0At2g48130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.121e-136Vitis vinifera1622281_atCD715637hypothetical LOC100250160-2e-11At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.029e-444Zea maysZm.17234.1.S1_atCK145263hypothetical protein LOC100192939-2e-4At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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