Gene omics information

Query gene ID PtpAffx.200510.1.S1_at
Gene name 2-oxoglutarate-dependent dioxygenase
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.200510.1.S1_atpmrna10322-oxoglutarate-dependent dioxygenase-2e-6At1g528202-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.7794.9PtpAffx.225469.1.S1_s_atpmrna44836cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein-3e-6At3g52970CYP76G1S.X.H.G.
0.5078.6PtpAffx.219298.1.S1_s_atpmrna35177cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein-1e+1At5g55980serine-rich protein-relatedS.X.H.G.
0.4673.7PtpAffx.33411.1.S1_atCA825123cytochrome P450-5e-13At2g42250CYP712A1S.X.H.G.
0.4471.9PtpAffx.224604.1.S1_atpmrna43290hypothetical protein-5e-4At5g04370NAMT1S.X.H.G.
0.1219.6PtpAffx.216782.1.S1_atpmrna31779hypothetical protein-2e-19At5g06900CYP93D1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.299.9GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
26.999.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
6.697.9GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.697.2GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.583.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-757PtpAffx.200507.1.S1_atpmrna1027hypothetical protein-5e-1At1g28030oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.131e-552PtpAffx.200508.1.S1_s_atpmrna1028hypothetical protein-4e-1At1g28030oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.131e-552PtpAffx.200508.1.S1_atpmrna1028hypothetical protein-4e-1At1g28030oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.015e-240PtpAffx.200421.1.S1_atpmrna846hypothetical protein-2e-88At1g63680MUREC.G.S.X.
0.028e-136PtpAffx.1761.2.S1_atDN484457hypothetical protein-5e-2At1g75380wound-responsive protein-relatedC.G.S.X.
0.013e+034PtpAffx.215075.1.S1_atpmrna29040hypothetical protein-6e-1At4g37610BT5 (BTB AND TAZ DOMAIN PROTEIN 5)C.G.S.X.
0.013e+034PtpAffx.206497.1.S1_s_atpmrna12889hypothetical protein-4e-10At5g51350leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.013e+034PtpAffx.205093.1.S1_atpmrna10090hypothetical protein-7e-16At4g29860EMB2757 (EMBRYO DEFECTIVE 2757)C.G.S.X.
0.023e+034PtpAffx.203.2.S1_atCV259289hypothetical protein-6e-24At5g16600MYB43 (myb domain protein 43)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.212e-654Arabidopsis thalianaAt1g528208417152-oxoglutarate-dependent dioxygenase, putativeF:oxidoreductase activity;P:unknown;C:unknown;POBFM---C.G.S.X.
0.035e-240Glycine maxGmaAffx.28924.1.S1_atAW704488--3e+0At5g61590AP2 domain-containing transcription factor family proteinC.G.S.X.
0.021e+034Hordeum vulgareHVSMEa0016G17r2_atHVSMEa0016G17r2--7e-1At4g36410UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)C.G.S.X.
0.024e+034Oryza sativaOs07g06030009635.m04118--9e+0At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.024e-240Triticum aestivumTaAffx.52479.1.S1_atCA714716--8e-2At5g58990unknown proteinC.G.S.X.
0.037e-134Vitis vinifera1620225_s_atCD798094--1e+0At5g38720unknown proteinC.G.S.X.
0.032e-136Zea maysZm.8260.1.A1_atCO517867splicing factor, arginine/serine-rich 7-3e-1At3g09430unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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