Gene omics information

Query gene ID PtpAffx.20043.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.20043.1.S1_atCK103779hypothetical protein-4e-26At3g10380SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)S.X.H.G.
0.5380.5PtpAffx.40088.1.A1_atCA927295--6e-58At3g50590nucleotide bindingS.X.H.G.
0.5078.6PtpAffx.99026.1.S1_atCK101725hypothetical protein-3e-113At3g11130clathrin heavy chain, putativeS.X.H.G.
0.4067.0PtpAffx.126653.1.S1_s_atCX172171hypothetical protein-4e-18At5g23450ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)S.X.H.G.
0.3661.6PtpAffx.202165.1.S1_atpmrna4331hypothetical protein-1e-35At3g60860guanine nucleotide exchange family proteinS.X.H.G.
0.3052.0PtpAffx.159171.1.S1_atCA821479hypothetical protein-2e-158At1g79990protein binding / structural moleculeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.395.8GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-138PtpAffx.216320.1.S1_atpmrna31030hypothetical protein-4e-2At5g06110DNAJ heat shock N-terminal domain-containing protein / cell division protein-relatedC.G.S.X.
0.017e-136PtpAffx.207160.1.S1_atpmrna14209hypothetical protein-3e-54At1g10490unknown proteinC.G.S.X.
0.027e-136Ptp.3496.1.S1_atBU895674hypothetical protein-2e-5At5g09880RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.013e+034PtpAffx.211797.1.S1_s_atpmrna23135hypothetical protein-1e-23At3g21530endonuclease/exonuclease/phosphatase family proteinC.G.S.X.
0.013e+034PtpAffx.211724.1.S1_s_atpmrna22975hypothetical protein-7e-23At3g62470pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.013e+034PtpAffx.200418.1.S1_atpmrna842hypothetical protein-7e-77At1g63700YDA (YODA)C.G.S.X.
0.023e+034PtpAffx.151714.2.A1_atDN484868--3e-1At5g57565protein kinase family proteinC.G.S.X.
0.021e+132PtpAffx.36261.3.S1_atCV262635hypothetical protein-1e-1At2g47060serine/threonine protein kinase, putativeC.G.S.X.
0.011e+132PtpAffx.34170.1.S1_s_atCV245830hypothetical protein-2e-3At1g79975-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.214e-26119Arabidopsis thalianaAt3g10380820201SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)Subunit of the Putative Arabidopsis Exocyst Complex---C.G.S.X.
0.022e-138Glycine maxHgAffx.17065.1.S1_atCB378891--4e+0At5g36659-C.G.S.X.
0.032e-550Hordeum vulgareContig13731_atContig13731--4e-2At3g10380SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)C.G.S.X.
0.066e-240Oryza sativaOs08g0318500AK070862.1-Sec8 exocyst complex component specific domaincontaining protein4e-1At3g10380SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)C.G.S.X.
0.101e-757Triticum aestivumTaAffx.85950.1.S1_atCA618167--3e-1At2g02960zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+032Vitis vinifera1616795_atCA813984hypothetical LOC100248029-4e-9At1g67230LINC1 (LITTLE NUCLEI1)C.G.S.X.
0.046e-548Zea maysZm.7296.1.A1_atAW171827hypothetical protein LOC100279763-7e-1At5g53050hydrolase, alpha/beta fold family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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