Gene omics information

Query gene ID PtpAffx.200185.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.200185.1.S1_atpmrna342hypothetical protein-8e-4At2g44450BGLU15 (BETA GLUCOSIDASE 15)S.X.H.G.
0.8397.0PtpAffx.127059.1.A1_atCV258719hypothetical protein-1e-4At1g66270BGLU21S.X.H.G.
0.8096.0PtpAffx.209537.1.S1_atpmrna18896hypothetical protein-1e+0At3g59250F-box family proteinS.X.H.G.
0.7393.6PtpAffx.162331.1.S1_atCA821362--1e+0At4g11640ATSR (ARABIDOPSIS THALIANA SERINE RACEMASE)S.X.H.G.
0.5078.6PtpAffx.212416.1.S1_atpmrna24321hypothetical protein-5e-1At2g43350ATGPX3 (GLUTATHIONE PEROXIDASE 3)S.X.H.G.
0.3863.7PtpAffx.17653.3.A1_atCV242489--7e+0Atmg01020-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
80.8100.0GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
6.697.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
6.197.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
0.666.6GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
0.355.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
0.249.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
0.142.9GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
0.142.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
0.033.6GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
0.033.6GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0003057PtpAffx.200185.1.S1_s_atpmrna342hypothetical protein-8e-4At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.510712PtpAffx.127059.1.A1_atCV258719hypothetical protein-1e-4At1g66270BGLU21C.G.S.X.
0.211e-21105PtpAffx.203906.1.S1_atpmrna7716hypothetical protein-1e-5At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.042e-552PtpAffx.126815.1.S1_atCX167822--2e-3At1g66270BGLU21C.G.S.X.
0.027e-550PtpAffx.200551.1.S1_atpmrna1094hypothetical protein-5e-8At3g60120BGLU27 (BETA GLUCOSIDASE 27)C.G.S.X.
0.031e-346PtpAffx.29632.1.S1_atCX654220--2e-3At3g18080BGLU44 (B-S GLUCOSIDASE 44)C.G.S.X.
0.054e-344PtpAffx.32431.1.S1_atCA926237hypothetical protein-2e-30At5g36890BGLU42 (BETA GLUCOSIDASE 42)C.G.S.X.
0.064e-344PtpAffx.225133.1.S1_atpmrna44255hypothetical protein-2e-2At2g44470BGLU29 (BETA GLUCOSIDASE 29)C.G.S.X.
0.054e-344Ptp.5965.1.S1_s_atCX169141hypothetical protein-2e-4At3g60120BGLU27 (BETA GLUCOSIDASE 27)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.088e-446Arabidopsis thalianaAt2g44450819052BGLU15 (BETA GLUCOSIDASE 15)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFA---C.G.S.X.
0.201e-965Glycine maxGmaAffx.92564.1.S1_atCF808289--4e-5At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.032e+034Hordeum vulgareContig2737_atContig2737--9e-1At4g22100BGLU3 (BETA GLUCOSIDASE 2)C.G.S.X.
0.044e-757Oryza sativaOs06g0683300AK068614.1-Beta-glucosidase1e-10At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.045e-550Triticum aestivumTa.5589.2.S1_a_atCK152863--2e-8At5g36890BGLU42 (BETA GLUCOSIDASE 42)C.G.S.X.
0.131e-1583Vitis vinifera1622281_atCD715637hypothetical LOC100250160-2e-11At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.023e-446Zea maysZm.10740.1.S1_a_atCO520864non-cyanogenic beta-glucosidase-1e-2At3g60130BGLU16 (BETA GLUCOSIDASE 16)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage