Gene omics information

Query gene ID PtpAffx.198.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.198.1.S1_atCV242920hypothetical protein-3e-115Atcg00750-S.X.H.G.
0.7393.6PtpAffx.157535.1.A1_atCV256736hypothetical protein-7e-90Atcg00470-S.X.H.G.
0.5582.2PtpAffx.215607.1.S1_s_atpmrna29898--2e-1At5g04180ACA3 (ALPHA CARBONIC ANHYDRASE 3)S.X.H.G.
0.5582.2Ptp.3678.1.S1_atCV228737--7e+0At3g24860hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.3863.7PtpAffx.129071.1.S1_atCA821826hypothetical protein-2e-59Atcg00720-S.X.H.G.
0.3559.7PtpAffx.653.4.S1_a_atCV244767--2e+0At1g21870glucose-6-phosphate/phosphate translocator-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.098.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.494.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.892.1GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.691.3GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.590.9GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.233e-82307Ptp.6512.1.S1_s_atCK112728--2e-92Atcg00790-C.G.S.X.
0.102e-28129PtpAffx.213681.1.S1_atpmrna26711--1e-1Atcg00770-C.G.S.X.
0.102e-28129PtpAffx.213681.1.S1_x_atpmrna26711--1e-1Atcg00770-C.G.S.X.
0.106e-25117PtpAffx.213673.1.S1_x_atpmrna26697hypothetical protein-3e-1At4g12382-C.G.S.X.
0.025e-448Ptp.3820.1.S1_atDN496251EIN2 -like protein, nramp transporter-2e+0At5g22080DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.037e-344PtpAffx.214145.1.S1_atpmrna27522hypothetical protein-1e-1At4g11175translation initiation factor IF-1, chloroplast, putativeC.G.S.X.
0.037e-344PtpAffx.214145.1.S1_x_atpmrna27522hypothetical protein-1e-1At4g11175translation initiation factor IF-1, chloroplast, putativeC.G.S.X.
0.023e-242Ptp.1605.1.A1_atCK092069--2e-1At5g37070unknown proteinC.G.S.X.
0.011e-140PtpAffx.45339.1.S1_atDN503471hypothetical protein-6e-1At4g39955hydrolase, alpha/beta fold family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.233e-115416Arabidopsis thalianaAtcg00750--30S chloroplast ribosomal protein S11---C.G.S.X.
0.221e-96355Glycine maxGma.10842.1.S1_s_atCA851794--5e-107Atcg00790-C.G.S.X.
0.221e-57224Hordeum vulgareContig11738_atContig11738--5e-63Atcg00780-C.G.S.X.
0.271e-57226Oryza sativaOs.26688.1.S3_s_at---0C.G.S.X.
0.145e-34147Triticum aestivumTaAffx.128896.1.S1_s_atCD891469--2e-49Atcg00780-C.G.S.X.
0.239e-147519Vitis vinifera1617074_s_atCF204027.1similar to Os04g0237300 /// similar to RNA polymerase alpha subunit /// similar to RNA polymerase alpha subunit-3e-128Atcg00750-C.G.S.X.
0.223e-58226Zea maysZmAffx.1520.1.S1_at11990232-57--6e-66Atcg00780-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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