Gene omics information

Query gene ID PtpAffx.18964.1.A1_at
Gene name NAC domain protein, IPR003441
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.18964.1.A1_atCV227265NAC domain protein, IPR003441-4e-2At2g04560transferase, transferring glycosyl groupsS.X.H.G.
0.5078.6PtpAffx.205565.1.S1_atpmrna11000--6e-9At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.5078.6PtpAffx.24024.1.A1_s_atCV278445hypothetical protein-1e+0At4g10330glycine-rich proteinS.X.H.G.
0.5078.6PtpAffx.38638.1.S1_atCV261182hypothetical protein-7e-1At1g15390PDF1A (PEPTIDE DEFORMYLASE 1A)S.X.H.G.
0.4673.7Ptp.3644.1.S1_x_atCV2345112-oxoglutarate-dependent dioxygenase-2e-7At3g19000oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.3661.6PtpAffx.211391.1.S1_atpmrna22327hypothetical protein-8e-2At4g00770unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.799.7GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
16.199.6GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.596.1GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.395.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.995.1GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.992.5GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.389.8GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.289.3GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.088.0GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-961PtpAffx.134708.1.A1_atCV225426NAC domain protein, IPR003441-1e-1At5g12870MYB46 (MYB DOMAIN PROTEIN 46)C.G.S.X.
0.074e-342PtpAffx.109937.1.A1_atCK097441NAC domain protein, IPR003441-4e-1At4g24700unknown proteinC.G.S.X.
0.011e+034PtpAffx.225776.1.S1_s_atpmrna45366tir-nbs-lrr resistance protein /// hypothetical protein-1e-1At2g39690unknown proteinC.G.S.X.
0.034e+032PtpAffx.94706.1.A1_atCV274800--3e-1At2g24020unknown proteinC.G.S.X.
0.024e+032PtpAffx.221938.1.S1_atpmrna39057hypothetical protein-2e+0At2g03190ASK16 (ARABIDOPSIS SKP1-LIKE 16)C.G.S.X.
0.024e+032PtpAffx.215848.1.S1_atpmrna30265hypothetical protein-2e+0At4g27230HTA2 (histone H2A)C.G.S.X.
0.034e+032PtpAffx.215444.1.S1_atpmrna29641hypothetical protein-2e-30At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)C.G.S.X.
0.014e+032PtpAffx.211851.1.S1_atpmrna23255hypothetical protein-1e-54At3g23670KINESIN-12BC.G.S.X.
0.014e+032PtpAffx.209110.1.S1_atpmrna18021hypothetical protein-4e-14At3g53480PDR9 (PLEIOTROPIC DRUG RESISTANCE 9)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-238Arabidopsis thalianaAt2g04560814998transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:lipid A biosynthetic process;C:cellular_component unknown;OBP---C.G.S.X.
0.034e+032Glycine maxHgAffx.7419.1.S1_atCB824792--8e-2At3g56580zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.041e+032Hordeum vulgareHV02E02u_atHV02E02u--1e+0At1g65170ubiquitin carboxyl-terminal hydrolase family proteinC.G.S.X.
0.041e+034Oryza sativaOs10g0177400CR280915-Pathogenicity protein PATH531-like protein4e+0At2g44000-C.G.S.X.
0.042e-136Triticum aestivumTaAffx.37354.2.S1_atCA600649--4e+0At5g23330riboflavin biosynthesis protein-relatedC.G.S.X.
0.041e+128Vitis vinifera1622631_atCA818766--3e+0At2g15325protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.045e+030Zea maysZmAffx.413.1.A1_atAI676845--8e-1At5g13250unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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