Gene omics information

Query gene ID PtpAffx.18585.1.A1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.18585.1.A1_atCV241884--2e+0At4g05230ubiquitin family proteinS.X.H.G.
0.8397.0PtpAffx.5514.7.A1_a_atCV245932hypothetical protein-1e+0At1g21323unknown proteinS.X.H.G.
0.4268.6Ptp.4442.1.S1_atCV226738hypothetical protein-2e-31At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)S.X.H.G.
0.4067.0PtpAffx.209405.1.S1_atpmrna18629hypothetical protein-8e-48At2g28320pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinS.X.H.G.
0.2950.5PtpAffx.3645.1.S1_atBP934882catalase-0At4g35090CAT2 (CATALASE 2)S.X.H.G.
0.1626.9PtpAffx.143637.1.S1_atDN491542--2e+0At5g62950catalytic/ nucleotide bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.299.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
11.399.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
11.099.1GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
7.698.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
6.597.8GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
5.697.2GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
5.497.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.996.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.389.8GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-652PtpAffx.224671.1.S1_atpmrna43448hypothetical protein-3e-5At5g39390leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.088e-342PtpAffx.219602.1.S1_s_atpmrna35561hypothetical protein-6e-5At5g39390leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.018e-342PtpAffx.207609.1.S1_atpmrna15094hypothetical protein-1e-4At5g39390leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.023e-240PtpAffx.224988.1.S1_atpmrna43955hypothetical protein-3e-11At3g47090leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.021e-138PtpAffx.4971.3.A1_a_atCV267331hypothetical protein-5e-57At3g20800rcd1-like cell differentiation protein, putativeC.G.S.X.
0.031e-138PtpAffx.212956.1.S1_atpmrna25354hypothetical protein-3e+0At5g57920plastocyanin-like domain-containing proteinC.G.S.X.
0.041e-138PtpAffx.159839.1.A1_atCV257585hypothetical protein-2e+0At5g53905unknown proteinC.G.S.X.
0.015e-136PtpAffx.225064.1.S1_s_atpmrna44148hypothetical protein-2e-2At3g47570leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.015e-136PtpAffx.218605.1.S1_atpmrna34278hypothetical protein-6e-3At5g39390leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt4g05230825871ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MPFOV---C.G.S.X.
0.035e-136Glycine maxGmaAffx.33233.1.S1_atBQ741403--2e-7At1g18160protein kinase family proteinC.G.S.X.
0.023e+032Hordeum vulgareContig4995_atContig4995--2e-1At2g26290ARSK1 (root-specific kinase 1)C.G.S.X.
0.033e+034Oryza sativaOsAffx.2151.1.S1_at---0C.G.S.X.
0.053e-240Triticum aestivumTa.26411.1.A1_atCD490726--1e+0At4g07380unknown proteinC.G.S.X.
0.031e-136Vitis vinifera1612222_atCB349107hypothetical protein LOC100244118-1e-3At1g16560Per1-like family proteinC.G.S.X.
0.026e-134Zea maysZm.11985.1.A1_atCF636772hemoglobin 2-2e+0At2g16060AHB1 (ARABIDOPSIS HEMOGLOBIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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