Gene omics information

Query gene ID PtpAffx.18355.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.18355.1.S1_atCV253470hypothetical protein-2e-1At3g11520CYCB1S.X.H.G.
0.6791.1PtpAffx.127433.1.A1_atCV257930cyclin b-5e-3At3g11520CYCB1S.X.H.G.
0.6086.0PtpAffx.129961.1.S1_atCV226698hypothetical protein-8e-34At3g25980mitotic spindle checkpoint protein, putative (MAD2)S.X.H.G.
0.6086.0PtpAffx.56737.2.A1_a_atCX174790hypothetical protein-3e-41At4g33260CDC20.2S.X.H.G.
0.5078.6Ptp.4665.1.A1_s_atCV268985hypothetical protein-8e-34At1g44110CYCA1S.X.H.G.
0.4067.0PtpAffx.209751.1.S1_atpmrna19244hypothetical protein-5e-37At4g21270ATK1 (ARABIDOPSIS THALIANA KINESIN 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.499.8GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
19.899.7GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
7.898.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
5.196.8GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.894.9GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.794.7GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.992.5GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.886.4GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.388e-156551PtpAffx.127433.1.A1_atCV257930cyclin b-5e-3At3g11520CYCB1C.G.S.X.
0.061e-656PtpAffx.204823.1.S1_atpmrna9509cyclin-2e-6At2g26760CYCB1C.G.S.X.
0.021e+036PtpAffx.210783.1.S1_atpmrna21155hypothetical protein-2e-9At5g51740peptidase M48 family proteinC.G.S.X.
0.021e+036Ptp.4194.1.S1_x_atCV247315histone 2-2e-49At2g28720histone H2B, putativeC.G.S.X.
0.021e+036Ptp.4194.1.S1_atCV247315histone 2-2e-49At2g28720histone H2B, putativeC.G.S.X.
0.015e+034PtpAffx.938.1.A1_atCV270434hypothetical protein-9e-10At5g28770BZO2H3C.G.S.X.
0.015e+034PtpAffx.9325.3.A1_a_atCV261752hypothetical protein-1e-1At1g76300SmD3 (snRNP core protein SmD3)C.G.S.X.
0.015e+034PtpAffx.53600.1.S1_atDN499448--4e-32At3g05010transmembrane protein, putativeC.G.S.X.
0.015e+034PtpAffx.52988.1.S1_atCV265071--7e-2At2g03710SEP4 (SEPALLATA 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-138Arabidopsis thalianaAt3g11520820325CYCB1Encodes a B-type mitotic cyclin.---C.G.S.X.
0.272e-24115Glycine maxGma.8436.1.S1_s_atBG551662mitotic cyclin /// mitotic cyclin-2e-1At3g11520CYCB1C.G.S.X.
0.034e-446Hordeum vulgareContig7283_atContig7283--5e-8At2g26760CYCB1C.G.S.X.
0.022e+036Oryza sativaOs05g0237100AK103430.1-The start codon is not identified.5e-1At1g77390CYCA1C.G.S.X.
0.021e-242Triticum aestivumTa.26251.1.S1_atCD491705--4e-1At4g09153LCR36 (Low-molecular-weight cysteine-rich 36)C.G.S.X.
0.021e+034Vitis vinifera1619701_atBM437347hypothetical protein LOC100249763-1e-3At2g43070protease-associated (PA) domain-containing proteinC.G.S.X.
0.032e-240Zea maysZm.473.1.S1_a_atU66608.1cyclin type B-like-2e-1At4g35620CYCB2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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