Gene omics information

Query gene ID PtpAffx.17839.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.17839.1.S1_s_atCV243412hypothetical protein-3e-39At5g40200DegP9 (DegP protease 9)S.X.H.G.
0.7393.6PtpAffx.11859.3.A1_a_atCV251392hypothetical protein-1e-3At4g29480mitochondrial ATP synthase g subunit family proteinS.X.H.G.
0.6187.0PtpAffx.56685.1.S1_atCV256101hypothetical protein-2e-29At4g38150pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.6187.0PtpAffx.138607.1.A1_s_atDN491254hypothetical protein-2e-1At4g03160-S.X.H.G.
0.4471.9PtpAffx.86410.1.S1_s_atCV283900hypothetical protein-2e+1At5g11425unknown proteinS.X.H.G.
0.4067.0PtpAffx.109063.1.A1_atCV237280--5e-17At5g41770crooked neck protein, putative / cell cycle protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.698.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
6.397.7GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.796.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
3.494.0GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801653PtpAffx.17839.1.S1_atCV243412hypothetical protein-3e-39At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.390642PtpAffx.17839.2.A1_s_atCV254740hypothetical protein-2e-22At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.390642PtpAffx.17839.2.A1_atCV254740hypothetical protein-2e-22At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.022e-138PtpAffx.208862.1.S1_s_atpmrna17565hypothetical protein-4e-76At1g14810semialdehyde dehydrogenase family proteinC.G.S.X.
0.036e-136PtpAffx.67687.1.S1_atDN497463--5e-2At2g22040transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.016e-136PtpAffx.218871.1.S1_s_atpmrna34614hypothetical protein-3e+0At5g38580-C.G.S.X.
0.016e-136PtpAffx.218872.1.S1_atpmrna34615hypothetical protein-1e-1At2g27280unknown proteinC.G.S.X.
0.026e-136PtpAffx.218171.1.S1_atpmrna33712hypothetical protein-4e-1At2g24780unknown proteinC.G.S.X.
0.026e-136Ptp.6646.1.S1_atCV240563hypothetical protein-9e-53At1g50940ETFALPHA (electron transfer flavoprotein alpha)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.293e-39163Arabidopsis thalianaAt5g40200834018DegP9 (DegP protease 9)Encodes a putative DegP protease.---C.G.S.X.
0.439e-68258Glycine maxGma.10593.1.S1_atAW310042--2e-59At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.221e-963Hordeum vulgareContig13939_atContig13939--2e-25At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.261e-1895Oryza sativaOs02g0742500CA762673-Peptidase S1B, glutamyl endopeptidase I familyprotein3e-17At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.223e-1169Triticum aestivumTa.702.1.S1_atCK211421--3e-18At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.039e-340Vitis vinifera1617095_atCF209695similar to inositol polyphosphate multikinase-5e-9At5g07370IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA)C.G.S.X.
0.196e-1167Zea maysZm.11255.1.S1_atAY107659.1hypothetical protein LOC100217136-3e-32At5g40200DegP9 (DegP protease 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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