Gene omics information

Query gene ID PtpAffx.17771.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.17771.1.A1_atCV273533hypothetical protein-4e-13At1g75220integral membrane protein, putativeS.X.H.G.
0.5582.2PtpAffx.5406.1.A1_a_atCV283796hypothetical protein-1e-10At2g15290TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21)S.X.H.G.
0.5380.5PtpAffx.224342.1.S1_atpmrna42806hypothetical protein-2e-17At3g53700MEE40 (maternal effect embryo arrest 40)S.X.H.G.
0.5078.6PtpAffx.202616.1.S1_atpmrna5233ABC transporter family protein-8e-27At1g19800TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1)S.X.H.G.
0.3052.0Ptp.4121.1.S1_s_atBP934370glutathione-dependent formaldehyde dehydrogenase-1e-44At5g43940HOT5 (sensitive to hot temperatures 5)S.X.H.G.
0.2238.3PtpAffx.54604.1.S1_atDN486358hypothetical protein-1e-7At4g12060Clp amino terminal domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.594.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.590.9GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.490.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.289.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.188.6GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.088.0GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-136PtpAffx.216095.1.S1_atpmrna30668hypothetical protein-0At5g54260MRE11 (meiotic recombination 11)C.G.S.X.
0.032e+034PtpAffx.222771.1.S1_atpmrna40410hypothetical protein-1e-5At1g08930ERD6 (EARLY RESPONSE TO DEHYDRATION 6)C.G.S.X.
0.042e+034PtpAffx.222767.1.S1_atpmrna40406hypothetical protein-8e-1At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.042e+034PtpAffx.222767.1.S1_s_atpmrna40406hypothetical protein-8e-1At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.042e+034PtpAffx.221991.1.S1_atpmrna39160hypothetical protein-5e+0At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.022e+034PtpAffx.207361.1.S1_atpmrna14602hypothetical protein-2e-19At1g75220integral membrane protein, putativeC.G.S.X.
0.022e+034PtpAffx.200999.1.S1_atpmrna1966hypothetical protein-8e-43At3g27325hydrolase, acting on ester bondsC.G.S.X.
0.032e+034Ptp.6953.1.S1_atDN498434--3e-1Atcg00150-C.G.S.X.
0.038e+032PtpAffx.71022.1.S1_atDN503518hypothetical protein-2e-22At2g48020sugar transporter, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.144e-1375Arabidopsis thalianaAt1g75220843859integral membrane protein, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BMFPOAV---C.G.S.X.
0.171e-20101Glycine maxGmaAffx.79701.1.S1_atAW349693--2e-25At1g75220integral membrane protein, putativeC.G.S.X.
0.123e-1271Hordeum vulgarebags16h04_atbags16h04--9e-5At3g05400sugar transporter, putativeC.G.S.X.
0.108e-1065Oryza sativaOs05g0579000AK068594.1-Integral membrane protein1e-3At2g48020sugar transporter, putativeC.G.S.X.
0.164e-446Triticum aestivumTaAffx.141492.1.S1_atCA633696--3e+0At5g67350unknown proteinC.G.S.X.
0.274e-29127Vitis vinifera1613638_atCF209803hypothetical protein LOC100266019-4e-11At1g75220integral membrane protein, putativeC.G.S.X.
0.102e-1065Zea maysZm.3277.1.A1_atCO520691hypothetical protein LOC100193700-2e-8At1g75220integral membrane protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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