Gene omics information

Query gene ID PtpAffx.17660.2.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.17660.2.S1_s_atCV233145hypothetical protein-1e-7At2g23780zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5078.6Ptp.148.1.S1_atCV225595hypothetical protein-4e-35At3g55380UBC14 (ubiquitin-conjugating enzyme 14)S.X.H.G.
0.3357.5Ptp.1266.1.S1_a_atCV252807hypothetical protein-2e-31At3g55380UBC14 (ubiquitin-conjugating enzyme 14)S.X.H.G.
0.2645.2Ptp.6308.1.S1_atCV229172hypothetical protein-1e-10At3g15340PPI2 (proton pump interactor 2)S.X.H.G.
0.2441.8PtpAffx.97277.1.S1_atCV262016hypothetical protein-8e-38At5g51450RIN3 (RPM1 INTERACTING PROTEIN 3)S.X.H.G.
0.1932.7PtpAffx.22410.1.S1_atCV272742hypothetical protein-5e-29At3g02290zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.996.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
4.495.9GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
4.095.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.494.0GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7301673PtpAffx.202096.1.S1_atpmrna4173hypothetical protein-1e-2At1g19310zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.660961PtpAffx.17660.1.S1_atBP934556--2e-1At1g19310zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.092e-1687PtpAffx.8418.1.A1_atCV242567hypothetical protein-7e-3At1g74990zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.068e-1375PtpAffx.98207.1.S1_atCV241481--7e-13At2g23780zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.085e-1169Ptp.816.1.S1_s_atCK089704hypothetical protein-4e-1At4g03510RMA1C.G.S.X.
0.027e-136PtpAffx.33603.2.A1_atCV263112hypothetical protein-6e+0At5g43960nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.027e-136PtpAffx.3398.2.S1_a_atDN492300hypothetical protein-1e-10At5g23230NIC2 (NICOTINAMIDASE 2)C.G.S.X.
0.017e-136PtpAffx.210527.1.S1_atpmrna20641hypothetical protein-3e-8At3g47910ubiquitin thiolesterase/ zinc ion bindingC.G.S.X.
0.017e-136PtpAffx.209451.1.S1_atpmrna18726hypothetical protein-6e-36At1g23480ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.121e-757Arabidopsis thalianaAt2g23780816910zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV---C.G.S.X.
0.332e-50200Glycine maxGma.1576.1.S1_atAI856117--4e-2At1g19310zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-136Hordeum vulgareContig6076_atContig6076--1e-2At4g27470zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-242Oryza sativaOs12g0636000AK062128.1-Zn-finger, RING domain containing protein4e-2At4g27470zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.062e-344Triticum aestivumTa.20152.1.S1_atCK195704--2e-1At4g27470zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.287e-50196Vitis vinifera1616006_s_atCF519113hypothetical protein LOC100259073-2e+0At1g19310zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.039e-134Zea maysZmAffx.745.1.A1_atAI745776--3e+0At5g17650glycine/proline-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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