Gene omics information

Query gene ID PtpAffx.163330.1.S1_at
Gene name histone acetyltransferase
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4471.9PtpAffx.163330.1.S1_atCA824947histone acetyltransferase-8e-1At3g19590WD-40 repeat family protein / mitotic checkpoint protein, putativeS.X.H.G.
0.4471.9PtpAffx.221478.1.S1_a_atpmrna38379hypothetical protein-2e-9At1g15780unknown proteinS.X.H.G.
0.3863.7Ptp.1011.1.S1_s_atCV271147hypothetical protein-6e-1At5g27710unknown proteinS.X.H.G.
0.3559.7PtpAffx.11485.8.S1_atBP936020hypothetical protein-5e+0At5g41060zinc finger (DHHC type) family proteinS.X.H.G.
0.2543.6PtpAffx.1177.1.A1_atCV241985hypothetical protein-3e-37At5g06600UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)S.X.H.G.
0.2136.5PtpAffx.140962.1.A1_atCV238123--1e+0At5g28750thylakoid assembly protein, putativeS.X.H.G.
0.1729.1PtpAffx.87139.1.A1_atBP933283hypothetical protein-9e-6At1g35470SPla/RYanodine receptor (SPRY) domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.396.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.295.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.594.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
3.393.7GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.293.5GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.193.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-238Ptp.3977.1.S1_atDN498762hypothetical protein-6e-10At2g01080-C.G.S.X.
0.023e-136PtpAffx.55639.1.A1_atCV278985hypothetical protein-3e-6At2g03690coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family proteinC.G.S.X.
0.043e-136PtpAffx.55639.2.A1_a_atCV275329hypothetical protein-7e-2At2g03690coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family proteinC.G.S.X.
0.033e-136PtpAffx.37740.1.A1_atCV240890--6e+0At5g10870ATCM2 (chorismate mutase 2)C.G.S.X.
0.013e-136PtpAffx.17228.2.S1_a_atCV261896hypothetical protein-1e-160At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)C.G.S.X.
0.073e-136PtpAffx.149510.2.S1_atCA821947--7e+0At2g47360unknown proteinC.G.S.X.
0.043e-136Ptp.2674.1.S1_atCF234580--6e+0At4g29285LCR24 (Low-molecular-weight cysteine-rich 24)C.G.S.X.
0.033e-136Ptp.1928.1.A1_atCK093091hypothetical protein-9e-9At4g33210F-box family protein (FBL15)C.G.S.X.
0.033e-136Ptp.1446.1.S1_atCK092198--2e+0At4g274903' exoribonuclease family domain 1-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt3g19590821496WD-40 repeat family protein / mitotic checkpoint protein, putativeF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MBFOPA---C.G.S.X.
0.041e+034Glycine maxGmaAffx.55165.1.S1_atBI973096--3e+0At4g13490zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.044e-134Hordeum vulgareEBma08_SQ002_F06_atEBma08_SQ002_F06--9e-1At3g43170unknown proteinC.G.S.X.
0.042e+034Oryza sativaOsAffx.6497.1.S1_s_at---0C.G.S.X.
0.088e-134Triticum aestivumTaAffx.26634.1.S1_atCA686921--6e-1At3g55646unknown proteinC.G.S.X.
0.041e-238Vitis vinifera1611511_atCF517556--4e+0At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.031e+032Zea maysZm.12149.1.A1_atBM381810extensin-3e-1At1g01840unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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