Gene omics information

Query gene ID PtpAffx.161922.1.A1_s_at
Gene name autoinhibited calcium ATPase /// autoinhibited calcium ATPase
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.161922.1.A1_s_atCK094074autoinhibited calcium ATPase /// autoinhibited calcium ATPase-3e+0At4g17453unknown proteinS.X.H.G.
0.6086.0PtpAffx.147178.1.A1_s_atCV273717hypothetical protein-1e+0At3g10400RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.5078.6PtpAffx.72392.1.A1_atCA824901GH3 family protein-2e-27At2g23170GH3.3S.X.H.G.
0.4774.6PtpAffx.224943.1.S1_s_atpmrna43881hypothetical protein-8e-4At5g35550TT2 (TRANSPARENT TESTA 2)S.X.H.G.
0.4369.7Ptp.3664.1.S1_atBU836355hypothetical protein-2e-37At2g17530protein kinase family proteinS.X.H.G.
0.2136.5PtpAffx.137722.1.S1_atCX174412hypothetical protein-5e-49At5g607602-phosphoglycerate kinase-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.399.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
10.299.0GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
9.198.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
9.098.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
8.598.6GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
7.698.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
6.898.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
6.397.7GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.171e-150531PtpAffx.208747.1.S1_x_atpmrna17342autoinhibited calcium ATPase-3e-45At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.171e-150531PtpAffx.208747.1.S1_atpmrna17342autoinhibited calcium ATPase-3e-45At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.169e-106383PtpAffx.208173.1.S1_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.169e-106383PtpAffx.208173.1.S1_x_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.091e-963PtpAffx.201699.1.S1_atpmrna3388autoinhibited calcium ATPase-2e-89At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.091e-963PtpAffx.201699.1.S1_x_atpmrna3388autoinhibited calcium ATPase-2e-89At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.134e-961Ptp.7148.1.S1_atDN488127--1e-7At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.056e-238PtpAffx.205722.1.S1_atpmrna11294autoinhibited calcium ATPase-4e-81At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.046e-238PtpAffx.202093.1.S1_s_atpmrna4169hypothetical protein-6e-2At1g10370ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e+032Arabidopsis thalianaAt4g174536240808unknown proteinF:unknown;P:unknown;C:unknown---C.G.S.X.
0.044e-342Glycine maxHgAffx.6849.1.S1_atCB825362--1e+0At4g38840auxin-responsive protein, putativeC.G.S.X.
0.041e+032Hordeum vulgareContig14133_atContig14133--9e-1At2g47840tic20 protein-relatedC.G.S.X.
0.021e+034Oryza sativaOs06g0703700AK112072.1-Conserved hypothetical protein6e-1At5g2354026S proteasome regulatory subunit, putativeC.G.S.X.
0.047e-134Triticum aestivumTa.11340.1.A1_atBQ169884--9e-1At2g41870remorin family proteinC.G.S.X.
0.534e-52202Vitis vinifera1622073_atCF404214--4e+0At5g02780In2-1 protein, putativeC.G.S.X.
0.031e+032Zea maysZm.11970.1.A1_atAW566367--6e+0At5g37480unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage