Gene omics information

Query gene ID PtpAffx.160277.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.160277.1.A1_atCV262870hypothetical protein-3e+0At4g27930unknown proteinS.X.H.G.
0.6791.1PtpAffx.224715.1.S1_s_atpmrna43527hypothetical protein-4e-25At1g11300ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingS.X.H.G.
0.4471.9PtpAffx.953.2.A1_atCV276105--1e+0At4g21580oxidoreductase, zinc-binding dehydrogenase family proteinS.X.H.G.
0.4471.9PtpAffx.95587.1.A1_atCV240701hypothetical protein-1e+0At5g53280PDV1 (PLASTID DIVISION1)S.X.H.G.
0.3357.5PtpAffx.214372.1.S1_atpmrna27964hypothetical protein-2e+0At3g28140calmodulin-binding proteinS.X.H.G.
0.2747.1PtpAffx.953.2.A1_a_atCV276105--1e+0At4g21580oxidoreductase, zinc-binding dehydrogenase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.2100.0GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
25.299.9GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
8.298.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
6.697.9GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.289.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
1.886.4GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.279.6GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.279.6GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.279.6GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
0.974.2GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.712e-110398Ptp.6812.1.S1_atDN496118hypothetical protein-1e+0At5g03500transcription coactivatorC.G.S.X.
0.263e-32139PtpAffx.146934.1.A1_atCV271907hypothetical protein-9e-1At2g24800peroxidase, putativeC.G.S.X.
0.072e-240PtpAffx.153303.1.A1_atCV260981hypothetical protein-3e-1At4g27580unknown proteinC.G.S.X.
0.063e-136PtpAffx.219195.1.S1_atpmrna35047hypothetical protein-1e+0At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.025e+032PtpAffx.9327.3.A1_a_atCK095597hypothetical protein-6e-25At1g56450PBG1C.G.S.X.
0.035e+032PtpAffx.218118.1.S1_atpmrna33646hypothetical protein-4e-1At5g41560-C.G.S.X.
0.025e+032PtpAffx.217219.1.S1_atpmrna32395hypothetical protein-3e-3At1g09790COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR)C.G.S.X.
0.045e+032PtpAffx.215917.1.S1_atpmrna30387hypothetical protein-8e-1At4g07380unknown proteinC.G.S.X.
0.035e+032PtpAffx.210984.1.S1_atpmrna21574hypothetical protein-2e-14At3g22780TSO1 (CHINESE FOR 'UGLY')C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt4g27930828906unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;P---C.G.S.X.
0.102e-240Glycine maxGma.8080.1.S1_atAW310788--9e-1At2g47170ARF1A1CC.G.S.X.
0.047e+030Hordeum vulgareHU13F23r_atHU13F23r--2e+0At3g09510nucleic acid bindingC.G.S.X.
0.047e+032Oryza sativaOsAffx.31178.1.S1_at---0C.G.S.X.
0.054e+032Triticum aestivumTaAffx.11101.1.S1_atBQ609676--6e-1At2g39470PPL2 (PsbP-like protein 2)C.G.S.X.
0.064e-340Vitis vinifera1608720_atCF403625--2e-1At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)C.G.S.X.
0.032e+128Zea maysZmAffx.726.1.A1_atAI739956--3e+0At2g32360ubiquitin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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