Gene omics information

Query gene ID PtpAffx.157213.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.157213.1.S1_atCV257441hypothetical protein-2e-6At5g62640proline-rich family proteinS.X.H.G.
0.4369.7PtpAffx.5530.1.S1_atCV28128110-formyltetrahydrofolate synthetase-7e-50At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)S.X.H.G.
0.2950.5Ptp.3326.1.S1_atDN486025--2e+0At1g01160SSXT protein-related / transcription co-activator-relatedS.X.H.G.
0.2034.6Ptp.4883.1.S1_atCK091059hypothetical protein-5e-1At2g20618-S.X.H.G.
0.1219.6Ptp.2940.1.S1_atBU833790hypothetical protein-9e+0At3g57590-S.X.H.G.
0.0711.6PtpAffx.27868.1.S1_atCV258914hypothetical protein-2e+1At5g37667unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.998.7GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
7.598.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
6.197.6GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
5.196.8GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.289.3GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-136Ptp.7052.1.A1_a_atCV265171hypothetical protein-5e-1At1g47830clathrin coat assembly protein, putativeC.G.S.X.
0.026e-136Ptp.7052.1.A1_atCV265171hypothetical protein-5e-1At1g47830clathrin coat assembly protein, putativeC.G.S.X.
0.026e-136Ptp.7052.2.A1_atCV276218hypothetical protein-4e-1At3g17570F-box family proteinC.G.S.X.
0.023e+034PtpAffx.79583.1.A1_atCV236854--4e-4At5g10490MSL2 (MscS-LIKE 2)C.G.S.X.
0.013e+034PtpAffx.223585.1.S1_s_atpmrna41645cc-nbs-lrr resistance protein-3e-1At3g27050unknown proteinC.G.S.X.
0.013e+034PtpAffx.222779.1.S1_atpmrna40424cc-nbs-lrr resistance protein-3e-1At3g27050unknown proteinC.G.S.X.
0.013e+034PtpAffx.219746.1.S1_atpmrna35775hypothetical protein-2e-6At5g02950PWWP domain-containing proteinC.G.S.X.
0.033e+034PtpAffx.208534.1.S1_atpmrna16932hypothetical protein-1e-5At5g18900oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.013e+034PtpAffx.201832.1.S1_atpmrna3650hypothetical protein-2e-5At1g77010pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-654Arabidopsis thalianaAt5g62640836385proline-rich family proteinnuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC---C.G.S.X.
0.221e-20101Glycine maxGma.4413.1.S1_atCD403009--9e-14At5g62640proline-rich family proteinC.G.S.X.
0.051e-963Hordeum vulgareContig6525_atContig6525--1e-3At5g62640proline-rich family proteinC.G.S.X.
0.042e-552Oryza sativaOs.9419.1.S1_at---0C.G.S.X.
0.032e+034Triticum aestivumTaAffx.52234.1.S1_atCA710869--3e+0At2g38310unknown proteinC.G.S.X.
0.031e-136Vitis vinifera1620881_atCF568956--3e-4At5g54900ATRBP45A (RNA-binding protein 45A)C.G.S.X.
0.032e-446Zea maysZm.9181.1.A1_atCA402930hypothetical protein LOC100192510-5e-2At2g28710zinc finger (C2H2 type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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