Gene omics information

Query gene ID PtpAffx.154543.1.A1_a_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.154543.1.A1_a_atCV268890--5e-24At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)S.X.H.G.
0.6688.7PtpAffx.78476.1.A1_atDN492751hypothetical protein-1e-4At2g03690coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family proteinS.X.H.G.
0.5884.2PtpAffx.7182.3.A1_atCV253214--6e-3At1g79390unknown proteinS.X.H.G.
0.5582.2PtpAffx.249.93.S1_x_atBP934988hypothetical protein-0At5g13490AAC2 (ADP/ATP carrier 2)S.X.H.G.
0.5078.6Ptp.2347.1.A1_x_atCV280648hypothetical protein-1e-140At3g27240cytochrome c1, putativeS.X.H.G.
0.5078.6PtpAffx.153669.1.A1_s_atCV247741hypothetical protein-1e-12At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeS.X.H.G.
0.4975.7Ptp.2347.1.A1_atCV280648hypothetical protein-1e-140At3g27240cytochrome c1, putativeS.X.H.G.
0.4875.4Ptp.7571.1.S1_s_atCK092545hypothetical protein-4e+0At5g55131-S.X.H.G.
0.4875.4PtpAffx.249.93.S1_atBP934988hypothetical protein-0At5g13490AAC2 (ADP/ATP carrier 2)S.X.H.G.
0.4875.4PtpAffx.49746.1.A1_atCV226295hypothetical protein-4e-57At1g48790mov34 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.099.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
11.699.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
9.798.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
9.098.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.898.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.197.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.188.6GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.088.0GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.987.2GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.886.4GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.420674Ptp.7142.1.S1_atCF231149hypothetical protein-2e-37At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.337e-138492PtpAffx.154543.2.A1_atCV262303hypothetical protein-1e-9At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.351e-77291Ptp.2922.1.S1_atCV269955hypothetical protein-5e-16At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.018e-240PtpAffx.209399.1.S1_x_atpmrna18617hypothetical protein-7e-27At2g39220PLP6 (PATATIN-LIKE PROTEIN 6)C.G.S.X.
0.018e-240PtpAffx.209399.1.S1_atpmrna18617hypothetical protein-7e-27At2g39220PLP6 (PATATIN-LIKE PROTEIN 6)C.G.S.X.
0.023e-138PtpAffx.77850.1.A1_atCV257351--4e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.013e-138PtpAffx.249.389.A1_atCV276737--1e-14At4g26370antitermination NusB domain-containing proteinC.G.S.X.
0.013e-138PtpAffx.201097.1.S1_atpmrna2166hypothetical protein-1e-4At5g56140KH domain-containing proteinC.G.S.X.
0.021e+036PtpAffx.73987.1.A1_atDN487699--7e+0At1g56555unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.265e-24113Arabidopsis thalianaAt4g34490829600ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)CYCLASE ASSOCIATED PROTEIN---C.G.S.X.
0.226e-1583Glycine maxGmaAffx.67775.2.S1_atBE802463--4e-27At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.064e-446Hordeum vulgareContig7594_atContig7594--4e-9At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.122e-656Oryza sativaOs03g07226009631.m05008-CAP protein family protein2e-17At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.061e-346Triticum aestivumTa.23196.1.S1_x_atCD452618--3e-4At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.136e-27121Vitis vinifera1608923_atBQ793918hypothetical protein LOC100262440-3e-7At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.064e-1065Zea maysZm.4990.1.A1_atAI586885hypothetical protein LOC100279338-6e-6At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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