Gene omics information

Query gene ID PtpAffx.153434.1.A1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.153434.1.A1_s_atCV264552hypothetical protein-2e-37At5g47720acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putativeS.X.H.G.
0.9199.2PtpAffx.5423.1.S1_s_atCV229504hypothetical protein-3e-24At4g11820MVA1S.X.H.G.
0.8397.0Ptp.4515.1.S1_atCV253179hypothetical protein-5e-79At5g47770FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1)S.X.H.G.
0.6791.1Ptp.4515.1.S1_s_atCV253179hypothetical protein-5e-79At5g47770FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1)S.X.H.G.
0.5078.6PtpAffx.147936.1.S1_s_atBP924717hypothetical protein-1e-21At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)S.X.H.G.
0.2441.8Ptp.6668.1.S1_atCN523821hypothetical protein-4e-38At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.797.9GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.697.2GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.434e-70266PtpAffx.153434.2.A1_atCK094158hypothetical protein-3e+0At5g52975unknown proteinC.G.S.X.
0.252e-56220Ptp.2967.1.S1_s_atDN489007hypothetical protein-5e-42At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.044e-240PtpAffx.79585.2.S1_s_atCV245428--3e-1At4g21216unknown proteinC.G.S.X.
0.044e-240PtpAffx.79585.2.S1_atCV245428--3e-1At4g21216unknown proteinC.G.S.X.
0.026e-136PtpAffx.211237.1.S1_atpmrna22065--3e-18At1g59610ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)C.G.S.X.
0.016e-136Ptp.1721.1.S1_atCV244342hypothetical protein-4e-52At1g14520MIOX1 (MYO-INISITOL OXYGENASE)C.G.S.X.
0.016e-136Ptp.1721.1.S1_s_atCV244342hypothetical protein-4e-52At1g14520MIOX1 (MYO-INISITOL OXYGENASE)C.G.S.X.
0.022e+034PtpAffx.765.1.A1_atCV276457hypothetical protein-3e-16At3g04520THA2 (Threonine Aldolase 2)C.G.S.X.
0.022e+034PtpAffx.494.1.S1_atCV239155hypothetical protein-3e-1At5g10480PAS2 (PASTICCINO 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.302e-37157Arabidopsis thalianaAt5g47720834823acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putativeF:acetyl-CoA C-acetyltransferase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFAP---C.G.S.X.
0.427e-47188Glycine maxGma.4468.1.S1_atCD414593--4e-23At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.102e-756Hordeum vulgareContig3472_atContig3472--1e-24At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.086e-859Oryza sativaOs09g0252100AK059654.1-Acetyl-CoA C-acetyltransferase2e-35At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.217e-342Triticum aestivumTa.6247.1.A1_x_atBJ306295--7e-5At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.495e-103373Vitis vinifera1620943_atCF202855.1--2e-36At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.113e-1271Zea maysZm.16489.1.S1_atCF637893thiolase1-1e-12At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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