Gene omics information

Query gene ID PtpAffx.149909.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.149909.1.S1_s_atAJ773011hypothetical protein-3e-141At2g13560malate oxidoreductase, putativeS.X.H.G.
0.6791.1Ptp.3086.1.S1_s_atBU832807hypothetical protein-4e-47At2g13560malate oxidoreductase, putativeS.X.H.G.
0.5784.2PtpAffx.150645.1.S1_atAJ778728hypothetical protein-2e-15At1g75420glycosyl transferase family 1 proteinS.X.H.G.
0.4268.6PtpAffx.84497.1.S1_s_atCF231611hypothetical protein-9e-17At3g18140transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.2747.1PtpAffx.83555.1.S1_s_atBI068935hypothetical protein-3e-4At1g14850NUP155S.X.H.G.
0.1729.1PtpAffx.23095.1.S1_atCX177404hypothetical protein-1e-3At3g02540RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.896.4GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.295.6GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.794.7GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0002177PtpAffx.149909.1.S1_atAJ773011hypothetical protein-3e-141At2g13560malate oxidoreductase, putativeC.G.S.X.
0.055e-859PtpAffx.156315.1.S1_atCN550016hypothetical protein-5e-57At4g00570malate oxidoreductase, putativeC.G.S.X.
0.023e-344PtpAffx.206712.1.S1_atpmrna13321hypothetical protein-7e-122At5g25880ATNADP-ME3 (NADP-malic enzyme 3)C.G.S.X.
0.025e-240PtpAffx.213297.1.S1_atpmrna26000hypothetical protein-4e-24At2g42120POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT)C.G.S.X.
0.042e-138PtpAffx.222654.1.S1_atpmrna40201hypothetical protein-2e-10At5g25880ATNADP-ME3 (NADP-malic enzyme 3)C.G.S.X.
0.042e-138PtpAffx.219268.1.S1_s_atpmrna35136hypothetical protein-1e-10At5g25880ATNADP-ME3 (NADP-malic enzyme 3)C.G.S.X.
0.022e-138PtpAffx.214344.1.S1_atpmrna27899hypothetical protein-6e-23At1g67300hexose transporter, putativeC.G.S.X.
0.018e-136PtpAffx.213382.1.S1_atpmrna26187hypothetical protein-7e-4At5g22030UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8)C.G.S.X.
0.028e-136PtpAffx.148504.1.S1_atBU832827aminotransferase family protein-2e-9At5g53970aminotransferase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.463e-141502Arabidopsis thalianaAt2g13560815842malate oxidoreductase, putativeF:oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity, ATP binding;P:response to salt stress, malate metabolic process;C:mitochondrion, chloroplast;BOMPFA---C.G.S.X.
0.272e-90333Glycine maxGmaAffx.11325.1.S1_atAW351168--2e-53At2g13560malate oxidoreductase, putativeC.G.S.X.
0.284e-111400Hordeum vulgareContig5489_atContig5489--7e-64At2g13560malate oxidoreductase, putativeC.G.S.X.
0.273e-84313Oryza sativaOs07g0496200AK061706.1-NAD-dependent malic enzyme 62 kDa isoform,mitochondrial precursor (EC 1.1.1.39) (NAD-ME)3e-48At2g13560malate oxidoreductase, putativeC.G.S.X.
0.282e-111402Triticum aestivumTa.7720.1.S1_a_atAJ612921--1e-56At2g13560malate oxidoreductase, putativeC.G.S.X.
0.144e-39161Vitis vinifera1621510_atCF405481--9e-29At2g13560malate oxidoreductase, putativeC.G.S.X.
0.092e-1169Zea maysZm.3666.1.A1_atBG873898hypothetical protein LOC100191942-1e-2At2g13560malate oxidoreductase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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