Gene omics information

Query gene ID PtpAffx.148459.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5178.9PtpAffx.148459.1.S1_atBU895346hypothetical protein-7e-24At5g49900catalytic/ glucosylceramidaseS.X.H.G.
0.5380.5PtpAffx.209407.1.S1_atpmrna18634hypothetical protein-2e-39At2g38970zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4572.3PtpAffx.55272.1.S1_atBP927962--5e-9At3g58050unknown proteinS.X.H.G.
0.3559.7PtpAffx.206196.1.S1_atpmrna12304hypothetical protein-4e-19At2g19090unknown proteinS.X.H.G.
0.3357.5PtpAffx.128202.1.A1_atBP931352type-b response regulator-1e+0At3g22540unknown proteinS.X.H.G.
0.3153.7Ptp.355.1.A1_atCK088544hypothetical protein-1e-13At1g74770protein binding / zinc ion bindingS.X.H.G.
0.2340.5PtpAffx.212425.1.S1_atpmrna24339hypothetical protein-5e-20At2g42400VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2)S.X.H.G.
0.2136.5PtpAffx.221194.1.S1_x_atpmrna37884hypothetical protein-1e-2At5g42830transferase family proteinS.X.H.G.
0.2034.6PtpAffx.21027.1.A1_atBP931070hypothetical protein-1e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)S.X.H.G.
0.1016.3PtpAffx.49841.1.A1_atCV243029hypothetical protein-9e-24At2g24260basic helix-loop-helix (bHLH) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.099.1GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
10.799.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
7.598.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.495.9GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.791.8GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.691.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.211e-44180PtpAffx.216718.1.S1_x_atpmrna31678hypothetical protein-5e-34At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.262e-31137Ptp.6068.1.S1_s_atDN486901hypothetical protein-2e-38At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.041e-138PtpAffx.215894.1.S1_s_atpmrna30353hypothetical protein-6e+0At5g48970mitochondrial substrate carrier family proteinC.G.S.X.
0.031e-138PtpAffx.115217.1.A1_atCV228706--4e+0At5g47630mtACP3 (mitochondrial acyl carrier protein 3)C.G.S.X.
0.031e-138Ptp.7998.1.A1_atCV283167hypothetical protein-1e-1At1g76610unknown proteinC.G.S.X.
0.025e-136PtpAffx.212567.1.S1_s_atpmrna24621hypothetical protein-5e-1At3g15357unknown proteinC.G.S.X.
0.025e-136PtpAffx.212567.1.S1_atpmrna24621hypothetical protein-5e-1At3g15357unknown proteinC.G.S.X.
0.035e-136PtpAffx.205421.1.S1_atpmrna10725hypothetical protein-6e+0At5g57747unknown proteinC.G.S.X.
0.025e-136PtpAffx.138084.1.S1_s_atCN519591--2e-28At3g63520CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.197e-24111Arabidopsis thalianaAt5g49900835053catalytic/ glucosylceramidaseF:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:integral to membrane, membrane;BPMOA---C.G.S.X.
0.341e-35151Glycine maxGmaAffx.19904.1.S1_atBU761513--1e-33At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.023e+032Hordeum vulgareContig14039_s_atContig14039--3e-1At2g18210unknown proteinC.G.S.X.
0.156e-23109Oryza sativaOs11g0242100AK069387.1-Protein of unknown function DUF608 domaincontaining protein8e-12At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.132e-1583Triticum aestivumTa.20469.1.S1_atCA642463--1e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.034e-134Vitis vinifera1609648_atCB347614hypothetical protein LOC100251834-8e-1At4g14960TUA6C.G.S.X.
0.228e-22103Zea maysZm.18304.1.S1_atCO522721--6e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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