Gene omics information

Query gene ID PtpAffx.14710.1.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4369.7PtpAffx.14710.1.A1_a_atCV269309hypothetical protein-2e+0At3g62907unknown proteinS.X.H.G.
0.3357.5PtpAffx.151469.1.S1_atDN494849hypothetical protein-7e-34At2g13650GONST1 (Golgi Nucleotide Sugar Transporter 1)S.X.H.G.
0.2543.6PtpAffx.24127.2.A1_a_atCV274197hypothetical protein-6e-6At3g51000epoxide hydrolase, putativeS.X.H.G.
0.2543.6PtpAffx.3718.1.A1_atCX167706hypothetical protein-6e-31At5g63620oxidoreductase, zinc-binding dehydrogenase family proteinS.X.H.G.
0.1321.6PtpAffx.30368.2.S1_s_atCX657356hypothetical protein-2e-3At3g51730saposin B domain-containing proteinS.X.H.G.
0.1118.1PtpAffx.208691.1.S1_s_atpmrna17244hypothetical protein-2e-81At1g60440ATPANK1 (PANTOTHENATE KINASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.198.1GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.297.6GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.195.5GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.794.7GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.494.0GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.494.0GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.691.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.590779PtpAffx.14710.3.A1_atCV241578hypothetical protein-3e-1At5g51880iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsC.G.S.X.
0.612e-117422PtpAffx.14710.2.S1_s_atAJ769160hypothetical protein-3e-1At2g02060transcription factorC.G.S.X.
0.554e-113408PtpAffx.202901.1.S1_atpmrna5744hypothetical protein-3e-2At4g33625unknown proteinC.G.S.X.
0.645e-106385PtpAffx.153720.1.A1_atCV245500--4e+0At4g17960unknown proteinC.G.S.X.
0.031e-138PtpAffx.101965.1.A1_atCV245253--1e-1At2g36261unknown proteinC.G.S.X.
0.026e-136PtpAffx.73768.1.S1_s_atCK105130hypothetical protein-7e-3At3g04630WDL1C.G.S.X.
0.026e-136Ptp.516.1.A1_atCK088234--4e-1At1g0108033 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeC.G.S.X.
0.026e-136Ptp.516.1.A1_s_atCK088234--4e-1At1g0108033 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeC.G.S.X.
0.022e+034PtpAffx.4667.1.S1_a_atCX657863hypothetical protein-8e-15At5g06340ATNUDX27 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 27)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Arabidopsis thalianaAt3g629076240899unknown proteinF:unknown;P:unknown;C:unknown---C.G.S.X.
0.144e-859Glycine maxGmaAffx.87532.1.S1_s_atBG155694--9e-1At2g24590splicing factor, putativeC.G.S.X.
0.032e-136Hordeum vulgareContig72_s_atContig72--5e-3At1g54220dihydrolipoamide S-acetyltransferase, putativeC.G.S.X.
0.043e+034Oryza sativaOsAffx.9066.1.S1_x_at---0C.G.S.X.
0.032e+034Triticum aestivumTaAffx.56779.1.S1_atCA644425--1e+0At3g53500zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.081e-1065Vitis vinifera1609351_atCB975231--3e-1At5g14360ubiquitin family proteinC.G.S.X.
0.031e+130Zea maysZmAffx.701.1.A1_atAI737983hypothetical protein LOC100274433-2e-1At1g03170unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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