Gene omics information

Query gene ID PtpAffx.14629.1.S1_at
Gene name f-box family protein /// f-box family protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.14629.1.S1_atDN496142f-box family protein /// f-box family protein-2e-1At2g02870kelch repeat-containing F-box family proteinS.X.H.G.
0.5984.9PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinS.X.H.G.
0.5884.2Ptp.6541.1.S1_a_atCV227360hypothetical protein-1e-32At1g63290ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putativeS.X.H.G.
0.4673.7PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)S.X.H.G.
0.4067.0PtpAffx.48244.1.A1_atDN491049hypothetical protein-9e-5At2g37160transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.3863.7PtpAffx.100467.1.S1_atCX657915hypothetical protein-8e-40At4g16144-S.X.H.G.
0.3458.3PtpAffx.108517.1.A1_atCV236445hypothetical protein-3e-14At5g35460unknown proteinS.X.H.G.
0.3357.5PtpAffx.108603.1.A1_s_atCV279639hypothetical protein-8e-1At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)S.X.H.G.
0.3255.2PtpAffx.8691.1.S1_atCV231246hypothetical protein-7e-35At2g03120ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)S.X.H.G.
0.3052.0Ptp.4622.1.S1_s_atBP930041hypothetical protein-7e-93At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.295.6GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.188.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
1.987.2GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
1.886.4GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
1.886.4GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-1583PtpAffx.157735.1.S1_atCX184973f-box family protein-2e+0At5g49120senescence-associated protein-relatedC.G.S.X.
0.013e-138PtpAffx.6580.1.S1_atCV276747hypothetical protein-2e-32At3g14930HEME1C.G.S.X.
0.013e-138Ptp.3067.1.S1_atAJ744954.1iaa-amino acid hydrolase 11-9e-44At1g51760IAR3 (IAA-ALANINE RESISTANT 3)C.G.S.X.
0.013e-138Ptp.3067.1.S1_s_atAJ744954.1iaa-amino acid hydrolase 11-9e-44At1g51760IAR3 (IAA-ALANINE RESISTANT 3)C.G.S.X.
0.011e+036PtpAffx.219326.1.S1_s_atpmrna35213hypothetical protein-6e-9At5g07280EMS1 (EXCESS MICROSPOROCYTES1)C.G.S.X.
0.011e+036PtpAffx.213074.1.S1_atpmrna25587hypothetical protein-1e-16At5g07280EMS1 (EXCESS MICROSPOROCYTES1)C.G.S.X.
0.011e+036PtpAffx.210749.1.S1_atpmrna21086hypothetical protein-8e-9At5g07280EMS1 (EXCESS MICROSPOROCYTES1)C.G.S.X.
0.021e+036PtpAffx.208672.1.S1_atpmrna17205hypothetical protein-4e+0At4g14640CAM8 (CALMODULIN 8)C.G.S.X.
0.011e+036PtpAffx.201883.1.S1_atpmrna3750hypothetical protein-1e-1At4g27240zinc finger (C2H2 type) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Arabidopsis thalianaAt2g02870814818kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA---C.G.S.X.
0.077e-240Glycine maxGmaAffx.41354.1.S1_atBI786979--6e+0At5g66550Maf family proteinC.G.S.X.
0.041e-344Hordeum vulgareContig4656_atContig4656--1e-3At5g60570kelch repeat-containing F-box family proteinC.G.S.X.
0.026e+034Oryza sativaOsAffx.1755.1.S1_x_at---0C.G.S.X.
0.033e+034Triticum aestivumTaAffx.26941.1.S1_atCA683034--2e+1At5g67410unknown proteinC.G.S.X.
0.022e-136Vitis vinifera1613496_atCB914898hypothetical protein LOC100250070-2e-2At1g74510kelch repeat-containing F-box family proteinC.G.S.X.
0.028e-238Zea maysZm.1325.1.A1_atAY103596.1kelch motif family protein-3e-12At1g14330kelch repeat-containing F-box family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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