Gene omics information

Query gene ID PtpAffx.1459.3.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4471.9PtpAffx.1459.3.A1_a_atCV271826hypothetical protein-3e-16At4g22220ISU1S.X.H.G.
0.5582.2PtpAffx.204768.1.S1_atpmrna9390hypothetical protein-7e-14At5g09620octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinS.X.H.G.
0.5380.5PtpAffx.217815.1.S1_s_atpmrna33229hypothetical protein-2e+0At2g3719060S ribosomal protein L12 (RPL12A)S.X.H.G.
0.5078.6PtpAffx.205002.1.S1_atpmrna9897hypothetical protein-1e-17At2g44280-S.X.H.G.
0.4673.7PtpAffx.147068.2.A1_atCV264395hypothetical protein-3e-8At3g25910zinc ion bindingS.X.H.G.
0.2136.5PtpAffx.12284.2.S1_a_atCK091576hypothetical protein-2e-11At1g80360aminotransferase class I and II family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.697.9GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.296.8GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.495.9GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.095.3GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.095.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.894.9GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.794.7GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.475e-148523PtpAffx.1459.4.S1_a_atCV235472hypothetical protein-2e-33At4g22220ISU1C.G.S.X.
0.395e-111400Ptp.5753.1.S1_x_atCV275871hypothetical protein-3e-36At4g22220ISU1C.G.S.X.
0.353e-91335PtpAffx.1459.1.A1_x_atCV253429hypothetical protein-2e-37At4g22220ISU1C.G.S.X.
0.353e-91335PtpAffx.1459.1.A1_s_atCV253429hypothetical protein-2e-37At4g22220ISU1C.G.S.X.
0.109e-238PtpAffx.218326.1.S1_atpmrna33897hypothetical protein-6e-1At4g04080ISU3 (ISCU-LIKE 3)C.G.S.X.
0.019e-238PtpAffx.209469.1.S1_atpmrna18779hypothetical protein-2e-2At4g31540ATEXO70G1 (exocyst subunit EXO70 family protein G1)C.G.S.X.
0.023e-136Ptp.3731.1.S1_atCV269155AP2/ERF domain-containing transcription factor-4e-3At1g71130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.031e+034PtpAffx.71513.1.S1_atCK091662metal tolerance protein-3e-57At2g39450MTP11C.G.S.X.
0.021e+034PtpAffx.208614.1.S1_atpmrna17103hypothetical protein-5e-1At3g23710chloroplast inner membrane import protein Tic22, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.333e-1685Arabidopsis thalianaAt4g22220828316ISU1Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.---C.G.S.X.
0.301e-31137Glycine maxGma.5777.1.S1_atBU083289--3e-36At4g22220ISU1C.G.S.X.
0.101e-756Hordeum vulgareContig3807_atContig3807--7e-9At4g22220ISU1C.G.S.X.
0.093e-240Oryza sativaOs05g0568100AK069724.1-Nitrogen-fixing NifU-like, N-terminal domaincontaining protein5e-1At4g22220ISU1C.G.S.X.
0.113e-756Triticum aestivumTa.6120.1.S1_atBQ839046--2e-9At4g22220ISU1C.G.S.X.
0.232e-2097Vitis vinifera1619354_s_atCB973442hypothetical protein LOC100255079-2e-40At4g22220ISU1C.G.S.X.
0.141e-446Zea maysZm.16309.1.S1_atBU499624--4e-8At4g22220ISU1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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