Gene omics information

Query gene ID PtpAffx.145419.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.145419.1.S1_atDN499425hypothetical protein-5e-13At5g02290NAKS.X.H.G.
0.6791.1PtpAffx.31736.1.S1_s_atCX186616--4e-28At5g13080WRKY75S.X.H.G.
0.4471.9PtpAffx.204972.1.S1_atpmrna9834hypothetical protein-4e-1At5g16486-S.X.H.G.
0.2747.1Ptp.3685.1.S1_atCV264598hypothetical protein-3e-29At5g13080WRKY75S.X.H.G.
0.2543.6PtpAffx.64674.1.S1_s_atCV255442hypothetical protein-5e-2At1g05420OFP12 (OVATE FAMILY PROTEIN 12)S.X.H.G.
0.2340.5Ptp.5141.1.A1_atCV267910hypothetical protein-3e-8At2g03510band 7 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.099.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.597.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
6.397.7GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.995.1GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.347e-1685Ptp.5007.2.S1_s_atDN501018hypothetical protein-3e-29At2g28930APK1BC.G.S.X.
0.347e-1685Ptp.5007.2.S1_atDN501018hypothetical protein-3e-29At2g28930APK1BC.G.S.X.
0.347e-1685Ptp.5007.2.S1_a_atDN501018hypothetical protein-3e-29At2g28930APK1BC.G.S.X.
0.212e-1067PtpAffx.151163.1.S1_atCX173673hypothetical protein-6e-15At2g28930APK1BC.G.S.X.
0.126e-1065PtpAffx.42389.1.A1_a_atCV270177hypothetical protein-3e-16At2g02800APK2B (PROTEIN KINASE 2B)C.G.S.X.
0.034e-550PtpAffx.204085.1.S1_s_atpmrna8063hypothetical protein-6e-35At3g28690protein kinase, putativeC.G.S.X.
0.034e-550PtpAffx.204085.1.S1_atpmrna8063hypothetical protein-6e-35At3g28690protein kinase, putativeC.G.S.X.
0.036e-446PtpAffx.217025.1.S1_atpmrna32130hypothetical protein-2e-6At1g72540protein kinase, putativeC.G.S.X.
0.014e-240PtpAffx.225223.1.S1_atpmrna44414hypothetical protein-8e-5At4g27300S-locus protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.235e-1375Arabidopsis thalianaAt5g02290831880NAKEncodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.---C.G.S.X.
0.301e-1481Glycine maxGmaAffx.74918.1.S1_atAW755458--9e-5At5g02290NAKC.G.S.X.
0.115e-857Hordeum vulgareContig6247_atContig6247--1e-42At1g07570APK1AC.G.S.X.
0.075e-859Oryza sativaOs01g0973500AK069546.1-Protein kinase APK1A (EC 2.7.1.-)7e-48At1g07570APK1AC.G.S.X.
0.042e+034Triticum aestivumTaAffx.120688.1.S1_atCA602397--1e-11At5g01020protein kinase family proteinC.G.S.X.
0.022e+032Vitis vinifera1612580_atCB970852hypothetical protein LOC100246751-2e-5At3g46870pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.107e-444Zea maysZm.12080.1.A1_atBM348988protein kinase APK1A-1e-18At2g28930APK1BC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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