Gene omics information

Query gene ID PtpAffx.145.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.145.1.A1_atCV269750hypothetical protein-2e-3At1g33700catalytic/ glucosylceramidaseS.X.H.G.
0.6388.1PtpAffx.213504.1.S1_atpmrna26400hypothetical protein-1e-22At4g30080ARF16 (AUXIN RESPONSE FACTOR 16)S.X.H.G.
0.5582.2PtpAffx.22915.1.A1_atCV227207hypothetical protein-2e-15At2g29660zinc finger (C2H2 type) family proteinS.X.H.G.
0.5078.6PtpAffx.5537.1.A1_atCV244540--2e+0At5g07600oleosin / glycine-rich proteinS.X.H.G.
0.4369.7PtpAffx.208295.1.S1_atpmrna16497hypothetical protein-3e+0At4g14723-S.X.H.G.
0.3661.6PtpAffx.212481.1.S1_atpmrna24448hypothetical protein-1e-19At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.399.8GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
17.799.7GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
16.999.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
5.096.6GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.987.2GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.482.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
1.279.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.178.0GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
1.178.0GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-1067PtpAffx.216718.1.S1_x_atpmrna31678hypothetical protein-5e-34At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.052e-654Ptp.6068.1.S1_s_atDN486901hypothetical protein-2e-38At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.021e-138PtpAffx.146161.1.S1_atCX173062hypothetical protein-2e-40At5g53860emb2737 (embryo defective 2737)C.G.S.X.
0.035e-136PtpAffx.204721.1.S1_atpmrna9302hypothetical protein-3e-1At1g18630GR-RBP6 (glycine-rich RNA-binding protein 6)C.G.S.X.
0.025e-136PtpAffx.114066.1.A1_atCV272588hypothetical protein-2e+0At3g20966unknown proteinC.G.S.X.
0.042e+034PtpAffx.212305.1.S1_atpmrna24129hypothetical protein-6e-9At2g40740WRKY55C.G.S.X.
0.032e+034PtpAffx.209449.1.S1_atpmrna18723proline transporter-1e+1At5g59845gibberellin-regulated family proteinC.G.S.X.
0.012e+034PtpAffx.204597.1.S1_s_atpmrna9026hypothetical protein-6e-42At4g34610BLH6 (BELL1-LIKE HOMEODOMAIN 6)C.G.S.X.
0.012e+034PtpAffx.204597.1.S1_atpmrna9026hypothetical protein-6e-42At4g34610BLH6 (BELL1-LIKE HOMEODOMAIN 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-344Arabidopsis thalianaAt1g33700840261catalytic/ glucosylceramidaseF:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:vacuole;BPMOA---C.G.S.X.
0.071e-757Glycine maxGmaAffx.19904.1.S1_atBU761513--1e-33At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.145e-548Hordeum vulgareContig13060_atContig13060--5e-10At4g10060catalytic/ glucosylceramidaseC.G.S.X.
0.032e-138Oryza sativaOs11g0242100AK069387.1-Protein of unknown function DUF608 domaincontaining protein8e-12At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.086e-342Triticum aestivumTa.20469.1.S1_atCA642463--1e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.085e-754Vitis vinifera1606839_atCF403271hypothetical protein LOC100246502-1e-4At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.054e-548Zea maysZm.18304.1.S1_atCO522721--6e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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