Gene omics information

Query gene ID PtpAffx.142329.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.142329.1.S1_s_atCK091530hypothetical protein-2e-3At2g32240-S.X.H.G.
0.4067.0PtpAffx.160091.2.A1_a_atCK089240hypothetical protein-7e-6At5g24800BZIP9 (BASIC LEUCINE ZIPPER 9)S.X.H.G.
0.3661.6PtpAffx.37459.2.S1_atCV268877hypothetical protein-4e-18At2g30590WRKY21S.X.H.G.
0.2747.1PtpAffx.149452.1.S1_atBU885230hypothetical protein-1e+0At1g33070sequence-specific DNA binding / transcription factorS.X.H.G.
0.2543.6PtpAffx.207107.1.S1_s_atpmrna14084hypothetical protein-1e-2At5g22890zinc finger (C2H2 type) family proteinS.X.H.G.
0.2034.6PtpAffx.130232.1.A1_s_atCA923951hypothetical protein-6e-55At3g23640HGL1 (heteroglycan glucosidase 1)S.X.H.G.
0.2034.6PtpAffx.53957.2.A1_atBI138658hypothetical protein-3e-4At4g00200DNA bindingS.X.H.G.
0.1932.7Ptp.4710.1.S1_s_atCK103144hypothetical protein-8e-6At3g18990VRN1 (REDUCED VERNALIZATION RESPONSE 1)S.X.H.G.
0.1626.9PtpAffx.128450.1.S1_atDN483927hypothetical protein-4e-29At1g22280protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.1626.9Ptp.5674.2.S1_s_atBU825206hypothetical protein-9e-54At1g27450APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.598.6GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
7.098.0GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
5.797.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.697.2GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.680672Ptp.329.2.S1_atCV232253hypothetical protein-3e-1At3g19360zinc finger (CCCH-type) family proteinC.G.S.X.
0.076e-26119PtpAffx.8047.1.A1_atCV265327hypothetical protein-3e-2At2g36610ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22)C.G.S.X.
0.022e-138PtpAffx.218967.1.S1_s_atpmrna34738hypothetical protein-5e+0At5g16100unknown proteinC.G.S.X.
0.017e-136PtpAffx.62753.1.A1_atCV267527hypothetical protein-2e-78At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)C.G.S.X.
0.017e-136PtpAffx.20105.1.S1_atCV267754hypothetical protein-1e-30At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.037e-136Ptp.3798.1.S1_atBU884370--3e+0At4g01026unknown proteinC.G.S.X.
0.027e-136Ptp.2200.1.A1_s_atCV260845hypothetical protein-2e-34At4g27990YGGT family proteinC.G.S.X.
0.027e-136Ptp.2200.1.A1_atCV260845hypothetical protein-2e-34At4g27990YGGT family proteinC.G.S.X.
0.023e+034PtpAffx.85855.1.S1_atCK096531--3e-2At4g05440EDA35 (embryo sac development arrest 35)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-344Arabidopsis thalianaAt2g32240817784-F:molecular_function unknown;P:response to cadmium ion;C:plasma membrane;MOBFPAV---C.G.S.X.
0.037e-136Glycine maxGmaAffx.6337.1.S1_atCA819123--1e-1At2g14000unknown proteinC.G.S.X.
0.021e+034Hordeum vulgarerbags21b16_s_atrbags21b16--1e-2At5g40200DegP9 (DegP protease 9)C.G.S.X.
0.021e+036Oryza sativaOs12g0511100CB650219-Hypothetical protein4e-1At1g20875unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.5360.1.S1_atCA713400--3e+0At3g01240unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1617186_atCF415580hypothetical protein LOC100264918-1e-30At5g35790G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1)C.G.S.X.
0.021e+130Zea maysZmAffx.1144.1.A1_atAW400064Hypothetical protein LOC100193235-8e-1At4g31470pathogenesis-related protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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