Gene omics information

Query gene ID PtpAffx.1404.2.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.1404.2.A1_a_atCV225922hypothetical protein-6e-5At3g24315AtSec20S.X.H.G.
0.7192.6PtpAffx.24511.1.A1_atCV257244hypothetical protein-1e+0At4g35450AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2)S.X.H.G.
0.5078.6PtpAffx.62025.1.S1_atCV257977--2e-43At1g47640unknown proteinS.X.H.G.
0.4471.9PtpAffx.70178.1.S1_s_atCV228915hypothetical protein-1e+0At5g33330RNase H domain-containing proteinS.X.H.G.
0.3357.5PtpAffx.3484.1.S1_s_atDN489134hypothetical protein-2e-23At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)S.X.H.G.
0.2950.5PtpAffx.13795.1.A1_atCK091278hypothetical protein-2e-9At4g13980AT-HSFA5S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.195.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034PtpAffx.200569.1.S1_atpmrna1123hypothetical protein-1e-12At1g10910-C.G.S.X.
0.041e+034Ptp.4174.1.S1_atDN499099hypothetical protein-6e-8At1g10910-C.G.S.X.
0.025e+032PtpAffx.36786.1.S1_atCV240505hypothetical protein-1e-48At3g55620emb1624 (embryo defective 1624)C.G.S.X.
0.035e+032PtpAffx.249.468.A1_atCF119463hypothetical protein-3e-97At1g56410ERD2 (EARLY-RESPONSIVE TO DEHYDRATION 2)C.G.S.X.
0.035e+032PtpAffx.249.485.S1_atCA933751hypothetical protein-1e-90At3g09440heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)C.G.S.X.
0.015e+032PtpAffx.249.10.S1_x_atCV272832hypothetical protein-0At3g09440heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)C.G.S.X.
0.025e+032PtpAffx.2376.1.S1_atCV241004hypothetical protein-6e-11At1g01300aspartyl protease family proteinC.G.S.X.
0.035e+032PtpAffx.224001.1.S1_s_atpmrna42230hypothetical protein-4e-1At5g50370adenylate kinase, putativeC.G.S.X.
0.015e+032PtpAffx.222966.1.S1_x_atpmrna40705hypothetical protein-2e-20At5g18590kelch repeat-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.076e-548Arabidopsis thalianaAt3g24315822020AtSec20F:molecular_function unknown;P:unknown;C:unknown;MFPO---C.G.S.X.
0.311e-963Glycine maxGma.3805.1.S1_atCD487663--6e-3At3g24315AtSec20C.G.S.X.
0.077e-340Hordeum vulgareContig17104_atContig17104--1e-7At3g24315AtSec20C.G.S.X.
0.042e+034Oryza sativaOs06g06586009634.m04343--2e+0At5g56600PRF3 (PROFILIN 3)C.G.S.X.
0.042e-136Triticum aestivumTaAffx.59023.1.S1_atCA609778--4e+0At4g34680GATA transcription factor 3, putative (GATA-3)C.G.S.X.
0.135e-1269Vitis vinifera1620796_atCF208990hypothetical LOC100245990-4e-5At3g24315AtSec20C.G.S.X.
0.054e-134Zea maysZmAffx.205.1.A1_atAI670190hypothetical protein LOC100276892-8e-1At4g17520nuclear RNA-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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