Gene omics information

Query gene ID PtpAffx.140157.1.A1_at
Gene name cytochrome P450
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8697.4PtpAffx.140157.1.A1_atCV268513cytochrome P450-2e+0At1g06580pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.4774.6PtpAffx.13856.1.S1_atCK088007hypothetical protein-6e-4At3g57070glutaredoxin family proteinS.X.H.G.
0.4673.7PtpAffx.71590.1.S1_atDN484720hypothetical protein-2e-8At5g53200TRY (TRIPTYCHON)S.X.H.G.
0.4471.9PtpAffx.84439.1.A1_atCV228369hypothetical protein-5e-3At5g03120unknown proteinS.X.H.G.
0.3964.6PtpAffx.119307.1.S1_atDN494321hypothetical protein-5e-10At5g15740unknown proteinS.X.H.G.
0.3863.7Ptp.7965.1.S1_a_atDN502706hypothetical protein-1e+0At5g43830unknown proteinS.X.H.G.
0.3863.7PtpAffx.73798.1.S1_atCV226761hypothetical protein-2e+0At5g42500disease resistance-responsive family proteinS.X.H.G.
0.3863.7Ptp.7877.1.A1_s_atCV261347glycosyltransferase-1e-25At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)S.X.H.G.
0.3661.6PtpAffx.103912.1.S1_atCV256169hypothetical protein-2e+1At4g22140DNA binding / protein binding / zinc ion bindingS.X.H.G.
0.3559.7PtpAffx.16347.1.A1_atDN489221--3e+0At1g03150GCN5-related N-acetyltransferase (GNAT) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.399.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
9.798.9GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
8.498.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
6.998.0GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
6.497.7GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
5.396.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.996.5GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-446PtpAffx.207579.1.S1_s_atpmrna15042cytochrome P450-7e-1At5g23040CDF1 (CELL GROWTH DEFECT FACTOR 1)C.G.S.X.
0.035e-136PtpAffx.220904.1.S1_atpmrna37379hypothetical protein-4e+0At5g57625allergen V5/Tpx-1-related family proteinC.G.S.X.
0.025e-136PtpAffx.218498.1.S1_atpmrna34143--3e+0At4g34881unknown proteinC.G.S.X.
0.045e-136PtpAffx.213442.1.S1_s_atpmrna26280hypothetical protein-5e-1At3g43180zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.035e-136PtpAffx.212752.1.S1_atpmrna24942hypothetical protein-4e-13At3g48120unknown proteinC.G.S.X.
0.045e-136Ptp.6555.2.A1_atCK093518--2e-10At2g19520FVEC.G.S.X.
0.022e+034PtpAffx.4979.1.A1_atBP932079hypothetical protein-1e+0At5g03760ATCSLA09C.G.S.X.
0.022e+034PtpAffx.31521.1.A1_atCA821565cytochrome P450-2e+0At5g23420HMGB6C.G.S.X.
0.022e+034PtpAffx.225870.1.S1_atpmrna45512hypothetical protein-2e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt1g06580837169pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBA---C.G.S.X.
0.034e-240Glycine maxGmaAffx.55917.1.S1_atBE657290--1e+0At5g24900CYP714A2C.G.S.X.
0.037e-134Hordeum vulgareContig3383_atContig3383--4e+0At4g27250dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyC.G.S.X.
0.021e+132Oryza sativaOs04g06254009632.m05180--2e+0At4g30450glycine-rich proteinC.G.S.X.
0.036e+032Triticum aestivumTaAffx.65098.1.A1_atBJ261912--1e+0At3g59052CPuORF18 (Conserved peptide upstream open reading frame 18)C.G.S.X.
0.047e+030Vitis vinifera1622623_atCF514619hypothetical protein LOC100258799-1e+0At1g64680unknown proteinC.G.S.X.
0.032e-136Zea maysZm.8685.1.A1_atCB351143--5e+0At5g27820ribosomal protein L18 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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