Gene omics information

Query gene ID PtpAffx.139489.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.139489.1.S1_s_atBU880707hypothetical protein-1e+0At1g53620unknown proteinS.X.H.G.
0.6791.1PtpAffx.120315.1.S1_atCX171118hypothetical protein-5e-16At3g30200-S.X.H.G.
0.6791.1PtpAffx.126036.1.S1_atBP926823--8e-1At3g11020DREB2B (DRE/CRT-BINDING PROTEIN 2B)S.X.H.G.
0.6791.1PtpAffx.55477.1.S1_s_atCX186924hypothetical protein-3e-51At3g24430HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101)S.X.H.G.
0.5582.2PtpAffx.381.3.A1_a_atBP928153--3e+0At2g26120glycine-rich proteinS.X.H.G.
0.4471.9PtpAffx.22483.1.S1_s_atDN499741hypothetical protein-4e-38At5g22800EMB1030 (EMBRYO DEFECTIVE 1030)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.697.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.597.1GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.096.6GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.596.1GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.495.9GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.495.9GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.395.8GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.295.6GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-90333Ptp.5036.1.S1_s_atCV234626hypothetical protein-7e-25At5g12470unknown proteinC.G.S.X.
0.336e-56218PtpAffx.204856.1.S1_atpmrna9595hypothetical protein-6e-1At3g52105unknown proteinC.G.S.X.
0.031e-138PtpAffx.208231.1.S1_atpmrna16378flavine-containing monoxygenase-8e-22At2g33230flavin-containing monooxygenase, putative / FMO, putativeC.G.S.X.
0.035e-136PtpAffx.93628.1.A1_atBP930043--1e+0At1g80970XH domain-containing proteinC.G.S.X.
0.015e-136PtpAffx.215380.1.S1_atpmrna29535hypothetical protein-2e-9At3g17740unknown proteinC.G.S.X.
0.025e-136Ptp.4684.1.S1_s_atCV233522tubulin, beta chain-0At5g12250TUB6 (BETA-6 TUBULIN)C.G.S.X.
0.032e+034PtpAffx.213988.1.S1_atpmrna27255hypothetical protein-1e-6At5g39280ATEXPA23 (ARABIDOPSIS THALIANA EXPANSIN A23)C.G.S.X.
0.022e+034PtpAffx.203088.1.S1_atpmrna6110hypothetical protein-2e-6At1g72220zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.027e+032PtpAffx.891.3.S1_a_atCF233972tubulin, beta chain-4e-153At5g62700TUB3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt1g53620841797unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFV---C.G.S.X.
0.103e-240Glycine maxGmaAffx.28586.1.S1_atCA782904--1e-1At1g22890unknown proteinC.G.S.X.
0.031e+130Hordeum vulgareContig6868_s_atContig6868--2e-6At4g29400unknown proteinC.G.S.X.
0.046e-136Oryza sativaOsAffx.12786.1.S1_at---0C.G.S.X.
0.035e+032Triticum aestivumTaAffx.27406.1.S1_atCA677217--1e+0At3g22120CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)C.G.S.X.
0.036e+030Vitis vinifera1621303_atCD801160hypothetical protein LOC100245359-2e-1At1g77660MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedC.G.S.X.
0.039e+030Zea maysZmAffx.936.1.S1_atAI677620--3e+0At3g10490anac052 (Arabidopsis NAC domain containing protein 52)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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