Gene omics information

Query gene ID PtpAffx.136498.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.136498.1.S1_atCF230021hypothetical protein-6e-3At1g52260ATPDIL1-5 (PDI-LIKE 1-5)S.X.H.G.
0.5582.2PtpAffx.148399.1.S1_atCF234711hypothetical protein-2e-2At3g25545unknown proteinS.X.H.G.
0.4875.4PtpAffx.200972.1.S1_x_atpmrna1900hypothetical protein-4e-9At5g40490RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4774.6Ptp.4561.1.S1_s_atBU826272hypothetical protein-6e-9At1g71860PTP1 (PROTEIN TYROSINE PHOSPHATASE 1)S.X.H.G.
0.4471.9PtpAffx.102441.1.S1_s_atCV131778--1e+0At5g55610unknown proteinS.X.H.G.
0.4067.0Ptp.4606.1.S1_atBP922769hypothetical protein-1e-40At4g28390AAC3 (ADP/ATP CARRIER 3)S.X.H.G.
0.3661.6PtpAffx.249.468.A1_atCF119463hypothetical protein-3e-97At1g56410ERD2 (EARLY-RESPONSIVE TO DEHYDRATION 2)S.X.H.G.
0.3661.6PtpAffx.22.2.S1_atCV256577hypothetical protein-6e-12At3g08550KOB1 (KOBITO)S.X.H.G.
0.2850.5PtpAffx.218860.1.S1_atpmrna34602hypothetical protein-1e-6At1g64880ribosomal protein S5 family proteinS.X.H.G.
0.2543.6PtpAffx.91803.1.S1_atDN500898hypothetical protein-2e-18At4g36195serine carboxypeptidase S28 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.198.1GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-138PtpAffx.225522.1.S1_atpmrna44928cc-nbs-lrr resistance protein-4e-1At1g68760ATNUDX1 (ARABIDOPSIS THALIANA NUDIX HYDROLASE 1)C.G.S.X.
0.015e-136PtpAffx.219441.1.S1_x_atpmrna35362cc-nbs-lrr resistance protein-1e-1At5g45210disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.015e-136PtpAffx.219441.1.S1_atpmrna35362cc-nbs-lrr resistance protein-1e-1At5g45210disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.015e-136PtpAffx.219444.1.S1_atpmrna35365cc-nbs-lrr resistance protein-2e+0At5g40370glutaredoxin, putativeC.G.S.X.
0.015e-136PtpAffx.219444.1.S1_x_atpmrna35365cc-nbs-lrr resistance protein-2e+0At5g40370glutaredoxin, putativeC.G.S.X.
0.025e-136PtpAffx.219219.1.S1_atpmrna35076hypothetical protein-5e-1At1g48630RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)C.G.S.X.
0.025e-136PtpAffx.218977.1.S1_atpmrna34749hypothetical protein-7e-1At5g40370glutaredoxin, putativeC.G.S.X.
0.025e-136PtpAffx.218977.1.S1_x_atpmrna34749hypothetical protein-7e-1At5g40370glutaredoxin, putativeC.G.S.X.
0.025e-136PtpAffx.217801.1.S1_atpmrna33209hypothetical protein-6e-1At5g54240unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-342Arabidopsis thalianaAt1g52260841656ATPDIL1-5 (PDI-LIKE 1-5)Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).---C.G.S.X.
0.102e-963Glycine maxGmaAffx.88516.1.S1_atBG046959--9e-3At3g16110ATPDIL1-6 (PDI-LIKE 1-6)C.G.S.X.
0.033e+032Hordeum vulgareContig4670_s_atContig4670--4e+0At4g32530vacuolar ATP synthase, putative / V-ATPase, putativeC.G.S.X.
0.023e+034Oryza sativaOsAffx.16777.1.S1_at---0C.G.S.X.
0.032e+034Triticum aestivumTa.15060.1.S1_atCA688344--2e+0At5g27980seed maturation family proteinC.G.S.X.
0.032e+032Vitis vinifera1621083_atCF511394--2e-1At3g63088RTFL14 (ROTUNDIFOLIA LIKE 14)C.G.S.X.
0.023e+032Zea maysZm.16890.1.A1_atBM381222hypothetical protein LOC100273286-2e+0At2g41440unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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