Gene omics information

Query gene ID PtpAffx.135825.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.135825.1.S1_atCF936294hypothetical protein-8e-34At3g46180UTR5 (UDP-GALACTOSE TRANSPORTER 5)S.X.H.G.
0.5078.6PtpAffx.131812.1.S1_atDN501570hypothetical protein-3e-4At3g25910zinc ion bindingS.X.H.G.
0.5078.6Ptp.2014.1.S1_s_atCV258759hypothetical protein-2e-50At4g29490aminopeptidase/ manganese ion bindingS.X.H.G.
0.4369.7Ptp.3469.1.S1_s_atCK100709hypothetical protein-3e-24At5g18640lipase class 3 family proteinS.X.H.G.
0.4067.0Ptp.3625.1.A1_atCV267089hypothetical protein-2e-12At3g07560PEX13 (PEROXIN 13)S.X.H.G.
0.3661.6PtpAffx.99107.3.A1_s_atCV240653hypothetical protein-6e-64At4g19640ARA7S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.794.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.216e-60232PtpAffx.16409.1.A1_atDN495749hypothetical protein-6e-6At5g59740UDP-galactose/UDP-glucose transporter-relatedC.G.S.X.
0.022e-138Ptp.731.1.A1_atCK088341hypothetical protein-9e-27At5g35700FIM2 (FIMBRIN-LIKE PROTEIN 2)C.G.S.X.
0.018e-136PtpAffx.201647.1.S1_atpmrna3265hypothetical protein-3e-18At1g75310AUL1C.G.S.X.
0.023e+034PtpAffx.98662.1.S1_atCV226285hypothetical protein-2e+0At5g22520unknown proteinC.G.S.X.
0.023e+034PtpAffx.86136.1.S1_atCV245562hypothetical protein-5e-10At1g31940unknown proteinC.G.S.X.
0.013e+034PtpAffx.56469.1.S1_atCV241388hypothetical protein-1e-2At3g29400ATEXO70E1 (exocyst subunit EXO70 family protein E1)C.G.S.X.
0.023e+034PtpAffx.44086.1.A1_atCV245626--1e+0At1g22680unknown proteinC.G.S.X.
0.013e+034PtpAffx.36675.1.A1_atCA930341hypothetical protein-4e-8At3g59670unknown proteinC.G.S.X.
0.023e+034PtpAffx.225677.1.S1_atpmrna45203MIKC mads-box transcription factor-5e-10At3g54340AP3 (APETALA 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.508e-34145Arabidopsis thalianaAt3g46180823761UTR5 (UDP-GALACTOSE TRANSPORTER 5)F:galactose transmembrane transporter activity;P:unknown;C:unknown;MFPOB---C.G.S.X.
0.251e-20101Glycine maxGmaAffx.77860.1.S1_atBI973641--8e-35At3g46180UTR5 (UDP-GALACTOSE TRANSPORTER 5)C.G.S.X.
0.129e-29127Hordeum vulgareContig9750_atContig9750--3e-10At5g59740UDP-galactose/UDP-glucose transporter-relatedC.G.S.X.
0.174e-22107Oryza sativaOs05g0115700AK070819.1-Conserved hypothetical protein1e-18At5g59740UDP-galactose/UDP-glucose transporter-relatedC.G.S.X.
0.026e-136Triticum aestivumTa.26624.1.A1_atCD491395--2e-5At1g03030phosphoribulokinase/uridine kinase family proteinC.G.S.X.
0.024e-238Vitis vinifera1613905_atCF210463hypothetical protein LOC100254141-3e-13At5g08160ATPK3C.G.S.X.
0.024e+032Zea maysZm.9971.1.A1_atBM338027hypothetical protein LOC100192482-1e+0At1g33760AP2 domain-containing transcription factor, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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