Gene omics information

Query gene ID PtpAffx.132883.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.132883.1.S1_atBI072375hypothetical protein-2e-1At4g10430-S.X.H.G.
0.4067.0PtpAffx.203551.1.S1_atpmrna7052chromatin remodeling complex subunit-4e-26At3g54460SNF2 domain-containing protein / helicase domain-containing protein / F-box family proteinS.X.H.G.
0.4067.0PtpAffx.219775.1.S1_x_atpmrna35842hypothetical protein-5e-1At5g03380heavy-metal-associated domain-containing proteinS.X.H.G.
0.3357.5PtpAffx.207242.1.S1_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinS.X.H.G.
0.3255.2PtpAffx.28701.2.S1_s_atBU867887hypothetical protein-1e-13At5g01520zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2340.5PtpAffx.5862.1.A1_atCV231890chromatin remodeling complex subunit-1e+0At2g31380STHS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.299.6GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
14.899.5GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
9.198.7GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
8.898.7GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
7.198.1GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.279.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.439e-143506Ptp.494.1.S1_s_atCV271388hypothetical protein-2e-4At1g18300atnudt4 (Arabidopsis thaliana Nudix hydrolase homolog 4)C.G.S.X.
0.071e-1273PtpAffx.42782.1.S1_atCV242867hypothetical protein-3e-3At1g18300atnudt4 (Arabidopsis thaliana Nudix hydrolase homolog 4)C.G.S.X.
0.102e-859Ptp.3930.1.S1_atBU870954hypothetical protein-3e-1At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)C.G.S.X.
0.102e-859Ptp.3930.1.S1_s_atBU870954hypothetical protein-3e-1At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)C.G.S.X.
0.072e-550PtpAffx.153098.1.A1_atCV267344hypothetical protein-5e-7At1g18300atnudt4 (Arabidopsis thaliana Nudix hydrolase homolog 4)C.G.S.X.
0.031e-344PtpAffx.1289.1.S1_atCV233213hypothetical protein-2e-3At5g58110ATPase activator/ chaperone bindingC.G.S.X.
0.012e-240PtpAffx.219762.1.S1_atpmrna35817EIN2 -like protein, nramp transporter-2e-13At5g03280EIN2 (ETHYLENE INSENSITIVE 2)C.G.S.X.
0.032e-240PtpAffx.105178.1.S1_atCV235583--2e-12At3g01790ribosomal protein L13 family proteinC.G.S.X.
0.016e-238PtpAffx.214267.1.S1_atpmrna27767glutamate-gated kainate-type ion channel receptor subunit GluR5-5e-3At5g11180ATGLR2.6C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136Arabidopsis thalianaAt4g10430826635-F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPO---C.G.S.X.
0.073e-136Glycine maxGma.8925.1.S1_atBU763359--2e+0At5g56800-C.G.S.X.
0.051e+032Hordeum vulgareEBem09_SQ002_L08_x_atEBem09_SQ002_L08--1e-1At2g27790nucleic acid binding / nucleotide bindingC.G.S.X.
0.034e-136Oryza sativaOs06g02034009634.m00993--1e-1At5g19090heavy-metal-associated domain-containing proteinC.G.S.X.
0.057e-134Triticum aestivumTa.13782.3.S1_x_atCA605938--4e+0At2g21010C2 domain-containing proteinC.G.S.X.
0.051e-238Vitis vinifera1619645_atCF202342.1--2e-1At2g35850unknown proteinC.G.S.X.
0.042e-238Zea maysZm.17973.1.A1_atAI812220--4e+0At3g24540protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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