Gene omics information

Query gene ID PtpAffx.132626.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5683.9PtpAffx.132626.1.S1_s_atCX170249hypothetical protein-1e-4At2g31130unknown proteinS.X.H.G.
0.4673.7PtpAffx.3753.2.S1_atCX181474hypothetical protein-7e-24At2g40960nucleic acid bindingS.X.H.G.
0.4369.7PtpAffx.205002.1.S1_atpmrna9897hypothetical protein-1e-17At2g44280-S.X.H.G.
0.3052.0PtpAffx.147068.2.A1_atCV264395hypothetical protein-3e-8At3g25910zinc ion bindingS.X.H.G.
0.2238.3PtpAffx.1459.3.A1_a_atCV271826hypothetical protein-3e-16At4g22220ISU1S.X.H.G.
0.1932.7PtpAffx.69764.2.A1_atCV265274hypothetical protein-6e-6At5g15400U-box domain-containing proteinS.X.H.G.
0.1016.3Ptp.5383.1.S1_atAJ768686hypothetical protein-1e-32At5g22000RHF2A (RING-H2 GROUP F2A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.295.6GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.894.9GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
3.193.2GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.892.1GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.892.1GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6201404PtpAffx.221272.1.S1_atpmrna38033hypothetical protein-2e-4At2g31130unknown proteinC.G.S.X.
0.395e-54212PtpAffx.212413.1.S1_atpmrna24314hypothetical protein-1e-2At2g16575unknown proteinC.G.S.X.
0.024e-240PtpAffx.87526.1.S1_atBU893569--2e-2At4g23130CRK5 (CYSTEINE-RICH RLK5)C.G.S.X.
0.034e-240PtpAffx.216210.1.S1_atpmrna30856hypothetical protein-7e-2At2g30920ATCOQ3 (ARABDIOPSIS THALIANA COENZYME Q 3)C.G.S.X.
0.022e-138PtpAffx.34170.2.S1_atCV243815hypothetical protein-2e+0At5g64530XND1C.G.S.X.
0.012e-138PtpAffx.204892.1.S1_atpmrna9663hypothetical protein-2e-24At5g12430DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.032e-138Ptp.1809.1.A1_atCK092857hypothetical protein-3e-1At5g64530XND1C.G.S.X.
0.026e-136PtpAffx.205575.1.S1_atpmrna11017hypothetical protein-7e-31At1g77020DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.022e+034PtpAffx.41881.1.S1_atDN484168--3e-6At4g11460protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-448Arabidopsis thalianaAt2g31130817669unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBF---C.G.S.X.
0.036e-136Glycine maxGmaAffx.44282.1.S1_atBE022959--3e+0At1g65681-C.G.S.X.
0.022e-136Hordeum vulgareHA28H16r_atHA28H16r--1e+0At1g80940unknown proteinC.G.S.X.
0.023e+034Oryza sativaOsAffx.4347.1.S1_at---0C.G.S.X.
0.032e+034Triticum aestivumTaAffx.31731.1.S1_atCA609010--7e-1At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)C.G.S.X.
0.031e-136Vitis vinifera1621410_atCF519140--1e-6At5g09225unknown proteinC.G.S.X.
0.033e+032Zea maysZm.13136.1.A1_atCA404810hypothetical protein LOC100191921-4e+0At4g32900aminoacyl-tRNA hydrolaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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