Gene omics information

Query gene ID PtpAffx.128825.2.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.128825.2.S1_a_atCK096703hypothetical protein-4e-7At5g67270ATEB1C (microtubule end binding protein 1)S.X.H.G.
0.8296.3PtpAffx.2265.10.A1_a_atCV246443hypothetical protein-2e-4At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)S.X.H.G.
0.8196.1PtpAffx.86796.1.A1_atDN490220hypothetical protein-1e-14At2g26180IQD6 (IQ-domain 6)S.X.H.G.
0.7794.9Ptp.6857.2.S1_s_atCA923790hypothetical protein-1e-1At4g35620CYCB2S.X.H.G.
0.7694.3PtpAffx.210026.1.S1_atpmrna19760hypothetical protein-1e-4At4g38070bHLH family proteinS.X.H.G.
0.6991.5Ptp.4412.2.S1_s_atCV237391hypothetical protein-1e-57At2g25880AtAUR2 (AtAurora2)S.X.H.G.
0.6791.1Ptp.759.1.S1_atCV259673tubulin alpha-7 chain-1e-82At4g14960TUA6S.X.H.G.
0.6791.1PtpAffx.201265.1.S1_atpmrna2509hypothetical protein-5e-7At3g20150kinesin motor family proteinS.X.H.G.
0.6791.1Ptp.6857.1.S1_s_atBU833205hypothetical protein-6e-9At1g20590cyclin, putativeS.X.H.G.
0.6791.1PtpAffx.200879.1.S1_atpmrna1723hypothetical protein-2e-6At2g26760CYCB1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.399.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
6.597.8GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
4.495.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.295.6GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-446PtpAffx.88847.1.A1_s_atCV249912--2e+0At4g12190zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.034e-240Ptp.5801.2.S1_a_atBU836809hypothetical protein-2e+0At1g24440protein binding / zinc ion bindingC.G.S.X.
0.036e-136PtpAffx.208420.1.S1_atpmrna16731hypothetical protein-3e+0At3g03240esterase/lipase/thioesterase family proteinC.G.S.X.
0.016e-136PtpAffx.206237.1.S1_atpmrna12376hypothetical protein-2e-33At2g37670WD-40 repeat family proteinC.G.S.X.
0.022e+034PtpAffx.80204.1.S1_atDN487093hypothetical protein-2e+0At5g16050GRF5 (GENERAL REGULATORY FACTOR 5)C.G.S.X.
0.022e+034PtpAffx.216574.1.S1_atpmrna31438hypothetical protein-2e+0At1g56220dormancy/auxin associated family proteinC.G.S.X.
0.022e+034PtpAffx.209959.1.S1_atpmrna19643hypothetical protein-1e-5At3g23560ALF5 (ABERRANT LATERAL ROOT FORMATION 5)C.G.S.X.
0.022e+034PtpAffx.209959.1.S1_a_atpmrna19643hypothetical protein-1e-5At3g23560ALF5 (ABERRANT LATERAL ROOT FORMATION 5)C.G.S.X.
0.022e+034PtpAffx.206893.1.S1_atpmrna13684hypothetical protein-6e+0At4g37850basic helix-loop-helix (bHLH) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-756Arabidopsis thalianaAt5g67270836862ATEB1C (microtubule end binding protein 1)encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.---C.G.S.X.
0.175e-1789Glycine maxGma.5303.1.A1_atCD398988--2e+0At5g62500ATEB1B (END BINDING PROTEIN 1B)C.G.S.X.
0.073e-342Hordeum vulgareContig11881_atContig11881--5e-17At5g67270ATEB1C (microtubule end binding protein 1)C.G.S.X.
0.071e-552Oryza sativaOs10g0498900AK108732.1-EB1 domain containing protein5e-17At5g67270ATEB1C (microtubule end binding protein 1)C.G.S.X.
0.044e-136Triticum aestivumTa.9651.1.A1_atBJ213208--5e-14At3g47690ATEB1AC.G.S.X.
0.185e-754Vitis vinifera1609851_atCF512845hypothetical protein LOC100262748-9e-54At5g67270ATEB1C (microtubule end binding protein 1)C.G.S.X.
0.091e-1169Zea maysZm.6324.1.A1_atAI586906microtubule-associated protein RP/EB family member 3-1e-14At5g67270ATEB1C (microtubule end binding protein 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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