Gene omics information

Query gene ID PtpAffx.126851.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.126851.1.A1_atCV283322hypothetical protein-6e+0At5g06890-S.X.H.G.
0.4067.0PtpAffx.132173.1.A1_atDN487132--7e-3At3g07920translation initiation factorS.X.H.G.
0.1729.1PtpAffx.200282.1.S1_atpmrna560hypothetical protein-6e-1At2g25840OVA4 (ovule abortion 4)S.X.H.G.
0.1016.3PtpAffx.205140.1.S1_atpmrna10177hypothetical protein-5e-1At2g40440BTB/POZ domain-containing proteinS.X.H.G.
0.046.9PtpAffx.108515.1.A1_atCV237662--3e+0At5g19240unknown proteinS.X.H.G.
0.035.2Ptp.3185.1.S1_atAF480620.1phenylalanine amonnia lyase-2e-33At3g10340PAL4 (Phenylalanine ammonia-lyase 4)S.X.H.G.
0.023.6PtpAffx.220848.1.S1_x_atpmrna37298hypothetical protein-2e+0At5g04120phosphoglycerate/bisphosphoglycerate mutase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.798.3GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
6.397.7GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.197.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.696.2GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.195.5GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.095.3GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.995.1GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.594.3GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.645e-75282Ptp.3941.1.S1_atCV230881hypothetical protein-8e-40At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)C.G.S.X.
0.021e-138PtpAffx.66419.2.A1_atCV280833--2e+0At3g49860ATARLA1B (ADP-ribosylation factor-like A1B)C.G.S.X.
0.025e-136PtpAffx.4387.1.A1_s_atCV279497hypothetical protein-3e-15At5g06110DNAJ heat shock N-terminal domain-containing protein / cell division protein-relatedC.G.S.X.
0.025e-136PtpAffx.42102.1.S1_s_atDN485776hypothetical protein-6e-1At3g49860ATARLA1B (ADP-ribosylation factor-like A1B)C.G.S.X.
0.025e-136PtpAffx.42102.1.S1_atDN485776hypothetical protein-6e-1At3g49860ATARLA1B (ADP-ribosylation factor-like A1B)C.G.S.X.
0.035e-136PtpAffx.224559.1.S1_atpmrna43206hypothetical protein-7e-11At1g22130AGL104 (AGAMOUS-LIKE 104)C.G.S.X.
0.025e-136PtpAffx.204176.1.S1_atpmrna8225hypothetical protein-2e-16At5g15510-C.G.S.X.
0.015e-136PtpAffx.203584.1.S1_atpmrna7116hypothetical protein-1e-32At3g11450DNAJ heat shock N-terminal domain-containing protein / cell division protein-relatedC.G.S.X.
0.012e+034PtpAffx.86393.1.S1_s_atCV264156hypothetical protein-2e-81At3g23300dehydration-responsive protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e+032Arabidopsis thalianaAt5g06890830579-F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;P---C.G.S.X.
0.032e+034Glycine maxGmaAffx.53053.1.S1_atAW508962--1e-24At1g72440EDA25 (embryo sac development arrest 25)C.G.S.X.
0.073e+032Hordeum vulgareContig8437_atContig8437--1e-1At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)C.G.S.X.
0.022e-138Oryza sativaOsAffx.30149.1.S1_s_at---0C.G.S.X.
0.036e+032Triticum aestivumTa.10518.2.S1_atBJ317269--3e-1At1g43190polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putativeC.G.S.X.
0.032e+032Vitis vinifera1618238_atCB339270--2e-1At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.036e-134Zea maysZm.1661.1.A1_atBM07968150S ribosomal protein L27-5e-1At1g15840unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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