Gene omics information

Query gene ID PtpAffx.125021.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.125021.1.S1_atCK103071hypothetical protein-4e-20At2g40270protein kinase family proteinS.X.H.G.
0.5582.2Ptp.1329.1.S1_s_atCK093720--2e-78At1g64650-S.X.H.G.
0.4673.7PtpAffx.212189.1.S1_s_atpmrna23892hypothetical protein-2e-5At5g07070CIPK2 (CBL-INTERACTING PROTEIN KINASE 2)S.X.H.G.
0.4673.7Ptp.2457.1.S1_s_atCV264623s-adenosylmethionine synthetase 2-2e-165At3g17390MTO3 (METHIONINE OVER-ACCUMULATOR 3)S.X.H.G.
0.4067.0Ptp.4715.2.S1_s_atCV228991hypothetical protein-2e-9At4g30160VLN4 (ARABIDOPSIS THALIANA VILLIN 4)S.X.H.G.
0.3357.5PtpAffx.204785.1.S1_atpmrna9432hypothetical protein-8e-1At5g07150leucine-rich repeat family proteinS.X.H.G.
0.2747.1Ptp.1683.1.S1_a_atCV256655precursor of transferase serine hydroxymethyltransferase 3-1e-41At5g26780SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.999.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
7.998.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
6.497.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.096.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.796.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.600850Ptp.2656.1.S1_atCV256702hypothetical protein-7e-7At2g40270protein kinase family proteinC.G.S.X.
0.501e-110400Ptp.6412.1.S1_atCF216322hypothetical protein-3e-1At2g33990iqd9 (IQ-domain 9)C.G.S.X.
0.191e-45184Ptp.1690.1.A1_atCK092969hypothetical protein-1e+0At2g04031-C.G.S.X.
0.092e-1997PtpAffx.106438.1.A1_atCV269655hypothetical protein-1e-20At2g40270protein kinase family proteinC.G.S.X.
0.153e-1893PtpAffx.115638.1.S1_atAJ771554--3e-11At3g56050protein kinase family proteinC.G.S.X.
0.111e-1791PtpAffx.120780.1.A1_atCV265642hypothetical protein-6e-6At2g40270protein kinase family proteinC.G.S.X.
0.027e-446PtpAffx.208329.1.S1_atpmrna16559hypothetical protein-5e-83At3g01300protein kinase, putativeC.G.S.X.
0.027e-446PtpAffx.202479.1.S1_atpmrna4971hypothetical protein-1e-72At2g32980unknown proteinC.G.S.X.
0.027e-446PtpAffx.117698.1.S1_s_atBU879536hypothetical protein-1e-65At2g32980unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.204e-2099Arabidopsis thalianaAt2g40270818619protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA---C.G.S.X.
0.284e-27123Glycine maxGmaAffx.7254.1.A1_atAW397813--5e-21At3g56050protein kinase family proteinC.G.S.X.
0.064e-1271Hordeum vulgareContig13188_atContig13188--1e-4At5g58540protein kinase family proteinC.G.S.X.
0.051e-1275Oryza sativaOs01g0206800AY332472.1-Protein kinase domain containing protein1e-3At5g45840leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.025e-136Triticum aestivumTaAffx.30797.2.S1_s_atCA623819--1e-3At5g24610unknown proteinC.G.S.X.
0.136e-38157Vitis vinifera1610359_atCB971752hypothetical protein LOC100265601-8e-31At3g56050protein kinase family proteinC.G.S.X.
0.029e-134Zea maysZm.9588.1.A1_atBM333293--3e-1At1g65620AS2 (ASYMMETRIC LEAVES 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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