Gene omics information

Query gene ID PtpAffx.123412.1.S1_s_at
Gene name acyl:coa ligase acetate-coa synthetase-like protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0PtpAffx.123412.1.S1_s_atCN517487acyl:coa ligase acetate-coa synthetase-like protein-1e-4At5g16370AAE5 (ACYL ACTIVATING ENZYME 5)S.X.H.G.
0.8697.4PtpAffx.103190.1.S1_atCN524584cytochrome P450-2e+0At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)S.X.H.G.
0.8397.0Ptp.6831.1.S1_s_atCN519077hypothetical protein-2e+0At1g79040PSBR (photosystem II subunit R)S.X.H.G.
0.8397.0PtpAffx.308.5.S1_s_atCN523454cytochrome P450-6e+0At2g28270DC1 domain-containing proteinS.X.H.G.
0.6388.1PtpAffx.6696.2.S1_s_atBU866133hypothetical protein-4e+0At5g17540transferase family proteinS.X.H.G.
0.6388.1Ptp.6598.1.S1_s_atCN523342cytochrome P450 /// cytochrome P450-2e+0At3g19350MPC (MATERNALLY EXPRESSED PAB C-TERMINAL)S.X.H.G.
0.6187.0Ptp.4381.2.A1_a_atCV268269cytochrome P450-1e-4At3g48320CYP71A21S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.699.7GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
12.399.3GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.193.2GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.791.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.590.9GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.389.8GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6601754PtpAffx.225325.1.S1_atpmrna44590--7e-11At5g16370AAE5 (ACYL ACTIVATING ENZYME 5)C.G.S.X.
0.302e-93343PtpAffx.142326.1.S1_atCK091598acyl:coa ligase acetate-coa synthetase-like protein /// hypothetical protein-2e-2At1g68270AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.266e-23109PtpAffx.225188.1.S1_atpmrna44342acyl:coa ligase acetate-coa synthetase-like protein-2e-14At1g21530AMP-binding protein, putativeC.G.S.X.
0.244e-1893PtpAffx.224862.1.S1_atpmrna43743acyl:coa ligase acetate-coa synthetase-like protein-2e-10At1g75960AMP-binding protein, putativeC.G.S.X.
0.193e-1273PtpAffx.216343.1.S1_x_atpmrna31058hypothetical protein-6e-11At1g75960AMP-binding protein, putativeC.G.S.X.
0.193e-1273PtpAffx.216343.1.S1_atpmrna31058hypothetical protein-6e-11At1g75960AMP-binding protein, putativeC.G.S.X.
0.192e-1067PtpAffx.221625.1.S1_s_atpmrna38601acyl:coa ligase acetate-coa synthetase-like protein /// hypothetical protein-6e-3At1g21540AMP-binding protein, putativeC.G.S.X.
0.035e-240PtpAffx.32362.1.S1_atCV242633acyl:coa ligase acetate-coa synthetase-like protein-2e-2At1g68270AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.055e-240PtpAffx.205872.1.S1_atpmrna11640hypothetical protein-2e-7At1g20560AAE1 (ACYL ACTIVATING ENZYME 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-448Arabidopsis thalianaAt5g16370831498AAE5 (ACYL ACTIVATING ENZYME 5)F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPAV---C.G.S.X.
0.121e-1171Glycine maxGma.4483.1.S1_atCF921631--1e-9At1g75960AMP-binding protein, putativeC.G.S.X.
0.033e-136Hordeum vulgareHVSMEl0006J08r2_s_atHVSMEl0006J08r2--3e+0At5g38220hydrolaseC.G.S.X.
0.022e+132Oryza sativaOsAffx.17273.1.S1_at---0C.G.S.X.
0.031e-138Triticum aestivumTa.20015.1.A1_x_atCA664699--5e-7At5g16340AMP-binding protein, putativeC.G.S.X.
0.153e-1891Vitis vinifera1622047_atCB968668hypothetical protein LOC100256407-3e-8At1g75960AMP-binding protein, putativeC.G.S.X.
0.034e-342Zea maysZm.1579.1.S1_atAY107917.1AMP-binding protein-3e-7At1g77240AMP-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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