Gene omics information

Query gene ID PtpAffx.121653.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0PtpAffx.121653.1.A1_atCV231587hypothetical protein-7e-5At2g16405transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.5078.6PtpAffx.63094.1.A1_atCV254722--3e+0At2g23010serine carboxypeptidase S10 family proteinS.X.H.G.
0.4471.9PtpAffx.208317.1.S1_atpmrna16538hypothetical protein-5e-8At1g24160unknown proteinS.X.H.G.
0.3153.7PtpAffx.121381.1.A1_atCV283436--5e-10At1g70150zinc ion bindingS.X.H.G.
0.2340.5PtpAffx.128173.1.A1_atCV228436hypothetical protein-6e-1At2g24810pathogenesis-related thaumatin family proteinS.X.H.G.
0.2136.5PtpAffx.218531.1.S1_atpmrna34185hypothetical protein-1e-33At5g67320HOS15 (high expression of osmotically responsive genes 15)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.999.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
5.697.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.590.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.289.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.537e-92337PtpAffx.18853.1.A1_atCV231158hypothetical protein-1e+0At2g16405transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.235e-25115PtpAffx.249.423.A1_atCV279294--2e-2At2g16405transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.049e-238PtpAffx.204732.1.S1_atpmrna9318hypothetical protein-3e+0At3g16555F-box family proteinC.G.S.X.
0.059e-238PtpAffx.145218.1.A1_atBP936462hypothetical protein-2e-3At5g01330PDC3 (pyruvate decarboxylase-3)C.G.S.X.
0.043e-136PtpAffx.214096.1.S1_x_atpmrna27442hypothetical protein-8e-1At4g28290unknown proteinC.G.S.X.
0.023e-136PtpAffx.213361.1.S1_atpmrna26146hypothetical protein-8e-1At3g54020phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.013e-136PtpAffx.213000.1.S1_atpmrna25422hypothetical protein-2e-54At4g19900glycosyl transferase-relatedC.G.S.X.
0.031e+034PtpAffx.9248.1.S1_atCK091052hypothetical protein-4e-4At3g03980short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.031e+034PtpAffx.79594.1.S1_s_atCK098523hypothetical protein-2e-20At5g51970sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.077e-548Arabidopsis thalianaAt2g16405816138transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MFBOPA---C.G.S.X.
0.126e-342Glycine maxGmaAffx.28050.1.S1_atBG652837--1e-12At2g16405transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.032e+032Hordeum vulgareContig2024_atContig2024--4e+0At5g43520DC1 domain-containing proteinC.G.S.X.
0.042e+034Oryza sativaOs04g01714009637.m01935--8e-1At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.047e-238Triticum aestivumTaAffx.96690.1.S1_atCA689091--2e-1At1g19380unknown proteinC.G.S.X.
0.121e-652Vitis vinifera1619234_a_atCD802480hypothetical protein LOC100258922-2e-27At2g16405transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.034e-134Zea maysZm.17794.1.S1_atCK371286hypothetical protein LOC100274149-6e-6At4g18230-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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