Gene omics information

Query gene ID PtpAffx.119354.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.119354.1.A1_atBP935809hypothetical protein-1e-4At4g25640MATE efflux family proteinS.X.H.G.
0.4471.9PtpAffx.141002.1.A1_atCV237864--1e+0At2g12557unknown proteinS.X.H.G.
0.4471.9PtpAffx.121699.1.A1_atCV230184hypothetical protein-3e-17At5g52960unknown proteinS.X.H.G.
0.3762.3Ptp.313.3.A1_s_atCV249535hypothetical protein-6e+0At2g03320unknown proteinS.X.H.G.
0.3357.5PtpAffx.679.1.S1_s_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QS.X.H.G.
0.3357.5PtpAffx.679.1.S1_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QS.X.H.G.
0.2747.1Ptp.5938.1.S1_atBU837105hypothetical protein-1e-20At1g05190emb2394 (embryo defective 2394)S.X.H.G.
0.2136.5Ptp.7199.1.S1_s_atCX654989hypothetical protein-2e-46At3g1312030S ribosomal protein S10, chloroplast, putativeS.X.H.G.
0.1525.3PtpAffx.6001.1.S1_atCV237297hypothetical protein-3e-43At2g28000CPN60A (CHAPERONIN-60ALPHA)S.X.H.G.
0.1219.6PtpAffx.18034.1.A1_atCV257108hypothetical protein-1e-8At3g21200unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.399.2GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
10.098.9GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.398.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
6.497.7GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
5.797.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
5.697.2GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.497.0GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.295.6GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.992.5GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.393e-176619PtpAffx.213108.1.S1_atpmrna25650hypothetical protein-1e-24At4g25640MATE efflux family proteinC.G.S.X.
0.481e-134480PtpAffx.119354.2.A1_s_atCV264820hypothetical protein-3e-5At4g25640MATE efflux family proteinC.G.S.X.
0.092e-23111PtpAffx.98425.1.S1_atBU875119hypothetical protein-2e-5At4g25640MATE efflux family proteinC.G.S.X.
0.113e-963PtpAffx.202223.1.S1_atpmrna4451hypothetical protein-1e-30At4g00350MATE efflux family proteinC.G.S.X.
0.037e-136PtpAffx.216575.1.S1_atpmrna31439hypothetical protein-3e-1At1g20875unknown proteinC.G.S.X.
0.013e+034PtpAffx.225276.1.S1_atpmrna44505cc-nbs-lrr resistance protein-2e+0At5g42790PAF1C.G.S.X.
0.023e+034PtpAffx.215648.1.S1_atpmrna29945hypothetical protein-3e-3At4g22790MATE efflux family proteinC.G.S.X.
0.013e+034PtpAffx.206865.1.S1_atpmrna13631nbs-lrr resistance protein-4e-1At5g25410unknown proteinC.G.S.X.
0.013e+034PtpAffx.201632.1.S1_atpmrna3232--2e-12At1g19720pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-448Arabidopsis thalianaAt4g25640828669MATE efflux family proteinF:antiporter activity, drug transporter activity;P:multidrug transport;C:plasma membrane, membrane;BOPFAM---C.G.S.X.
0.163e-1583Glycine maxGma.10447.1.S1_atAW734913--3e-5At4g00350MATE efflux family proteinC.G.S.X.
0.047e-548Hordeum vulgareContig24145_atContig24145--1e-1At1g33100MATE efflux family proteinC.G.S.X.
0.024e+034Oryza sativaOs09g0468000AK103478.1-Multi antimicrobial extrusion protein MatE familyprotein3e+0At5g65380ripening-responsive protein, putativeC.G.S.X.
0.082e-963Triticum aestivumTa.24213.1.A1_atBJ253133--5e-3At1g11670MATE efflux family proteinC.G.S.X.
0.039e+030Vitis vinifera1619435_atCF201436.1--5e+0At1g62190small conjugating protein ligaseC.G.S.X.
0.036e-238Zea maysZm.3571.1.S1_atBG265645Hypothetical protein LOC100193516-4e+0At4g17030ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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