Gene omics information

Query gene ID PtpAffx.119343.2.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9PtpAffx.119343.2.A1_a_atBP936124hypothetical protein-4e-6At4g29780unknown proteinS.X.H.G.
0.9799.9PtpAffx.215817.1.S1_atpmrna30229AP2/ERF domain-containing transcription factor-8e-7At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)S.X.H.G.
0.9499.6PtpAffx.204670.1.S1_atpmrna9194AP2/ERF domain-containing transcription factor-7e-9At1g43160RAP2.6 (related to AP2 6)S.X.H.G.
0.9499.6Ptp.8041.2.A1_s_atDN488070hypothetical protein-1e-6At4g24570mitochondrial substrate carrier family proteinS.X.H.G.
0.9399.5PtpAffx.8810.1.S1_atCK096534AP2/ERF domain-containing transcription factor /// AP2/ERF domain-containing transcription factor-2e-34At1g21910AP2 domain-containing transcription factor family proteinS.X.H.G.
0.9299.3PtpAffx.158361.1.S1_atCA822309--1e+0At3g47510unknown proteinS.X.H.G.
0.9199.2PtpAffx.30602.1.A1_atCV268363hypothetical protein-1e-4At5g17800AtMYB56 (myb domain protein 56)S.X.H.G.
0.8997.8PtpAffx.106356.1.S1_atCX660277AP2/ERF domain-containing transcription factor-5e+0At3g15050IQD10 (IQ-domain 10)S.X.H.G.
0.8897.7PtpAffx.93687.1.S1_atBP927882AP2/ERF domain-containing transcription factor-1e+0At1g71450AP2 domain-containing transcription factor, putativeS.X.H.G.
0.8797.5PtpAffx.8577.2.A1_atCV256116--2e-31At4g08950EXO (EXORDIUM)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.9100.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
36.3100.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
1.076.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
0.974.2GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
0.974.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
0.974.2GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
0.563.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
0.459.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
0.459.5GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
0.459.5GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.582e-135482PtpAffx.119343.1.A1_a_atBP933189hypothetical protein-4e-10At5g12010unknown proteinC.G.S.X.
0.332e-39163PtpAffx.119343.4.A1_atDN488965--3e+0At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)C.G.S.X.
0.151e-28127PtpAffx.206660.1.S1_atpmrna13221hypothetical protein-2e-23At5g12010unknown proteinC.G.S.X.
0.252e-24113PtpAffx.29056.1.S1_atDN500805hypothetical protein-6e-6At5g12010unknown proteinC.G.S.X.
0.156e-652PtpAffx.73964.1.A1_atDN488882--1e+0At5g60800heavy-metal-associated domain-containing proteinC.G.S.X.
0.022e-240PtpAffx.208090.1.S1_atpmrna16068hypothetical protein-7e-1At4g00467-C.G.S.X.
0.054e-136PtpAffx.32899.1.A1_atCK095938--1e-1At5g64520XRCC2C.G.S.X.
0.034e-136Ptp.6245.1.A1_atCV245443hypothetical protein-3e-8At5g18850unknown proteinC.G.S.X.
0.021e+034PtpAffx.32901.1.A1_s_atCV230978hypothetical protein-2e-9At3g17470RelA/SpoT domain-containing protein / calcium-binding EF-hand family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.104e-652Arabidopsis thalianaAt4g29780829100unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MPF---C.G.S.X.
0.272e-21103Glycine maxGmaAffx.72063.1.S1_atAW102068--7e-5At4g29780unknown proteinC.G.S.X.
0.041e-136Hordeum vulgareEBro08_SQ008_H06_atEBro08_SQ008_H06--9e-1At3g47836unknown proteinC.G.S.X.
0.031e-448Oryza sativaOs01g05826009629.m03821-Conserved hypothetical protein7e-5At4g29780unknown proteinC.G.S.X.
0.045e-652Triticum aestivumTa.10520.1.S1_atAL828817--2e-2At4g29780unknown proteinC.G.S.X.
0.242e-27121Vitis vinifera1619478_atCD004753hypothetical protein LOC100247440-3e-9At5g12010unknown proteinC.G.S.X.
0.043e-238Zea maysZm.2671.1.S1_atAW066803--3e+0At1g26150PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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