Gene omics information

Query gene ID PtpAffx.119247.1.A1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2PtpAffx.119247.1.A1_atDN486218--4e+0At5g50665unknown proteinS.X.H.G.
0.3661.6PtpAffx.211622.1.S1_atpmrna22777--9e-6At1g35580CINV1 (cytosolic invertase 1)S.X.H.G.
0.3357.5PtpAffx.218251.1.S1_atpmrna33803hypothetical protein-2e+1At4g05050UBQ11 (UBIQUITIN 11)S.X.H.G.
0.0914.6PtpAffx.219999.1.S1_atpmrna36231hypothetical protein-9e-6At5g18170GDH1 (GLUTAMATE DEHYDROGENASE 1)S.X.H.G.
0.0711.6PtpAffx.206455.1.S1_atpmrna12806hypothetical protein-4e-2At1g56300DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.046.9PtpAffx.108322.1.A1_atCV245001--9e-1At5g49330AtMYB111 (myb domain protein 111)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.899.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
19.799.7GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.797.3GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.196.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.691.3GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.490.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.490.4GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.987.2GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.886.4GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-240PtpAffx.17967.1.A1_atCV266301--6e+0At5g61420MYB28 (myb domain protein 28)C.G.S.X.
0.034e-136PtpAffx.86475.1.S1_atDN493076--2e+0At3g62390unknown proteinC.G.S.X.
0.014e-136PtpAffx.218401.1.S1_atpmrna34001hypothetical protein-8e-105At1g08730XICC.G.S.X.
0.031e+034PtpAffx.100742.1.S1_atCV242765--4e-1At4g10270wound-responsive family proteinC.G.S.X.
0.026e+032PtpAffx.82571.1.A1_atCV241604--3e+0At3g16480MPPalpha (mitochondrial processing peptidase alpha subunit)C.G.S.X.
0.036e+032PtpAffx.80348.1.A1_atDN491427hypothetical protein-1e+0At3g55250unknown proteinC.G.S.X.
0.026e+032PtpAffx.67424.2.A1_atCV244827hypothetical protein-2e+0At3g14140oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.026e+032PtpAffx.66020.1.S1_atDN486303--7e+0At5g08460GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.026e+032PtpAffx.60219.1.S1_atCK097835hypothetical protein-7e-1At3g58300unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt5g50665835137unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.041e+034Glycine maxHgAffx.20023.1.S1_atCB378004--1e+0At5g41960unknown proteinC.G.S.X.
0.065e-134Hordeum vulgareEBed01_SQ003_C19_atEBed01_SQ003_C19--9e+0At5g23480DNA bindingC.G.S.X.
0.032e+034Oryza sativaOs01g0365201NM_194035.1--4e+0At1g49140NADH-ubiquinone oxidoreductase-relatedC.G.S.X.
0.041e+034Triticum aestivumTaAffx.39388.1.A1_atBG907623--8e-1At4g15830bindingC.G.S.X.
0.041e+032Vitis vinifera1618952_atCF405185--7e-1At4g18890brassinosteroid signalling positive regulator-relatedC.G.S.X.
0.032e+032Zea maysZm.18678.1.A1_a_atCO522483hypothetical protein LOC100193301-2e-8At5g65510AIL7 (AINTEGUMENTA-like 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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