Gene omics information

Query gene ID PtpAffx.11627.1.A1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.11627.1.A1_atCV258538--7e-1At2g30933-S.X.H.G.
0.6086.0PtpAffx.205095.1.S1_atpmrna10095argonaute protein group-1e-10At1g48410AGO1 (ARGONAUTE 1)S.X.H.G.
0.4471.9PtpAffx.69627.1.A1_s_atCV249641hypothetical protein-5e+0At5g04760myb family transcription factorS.X.H.G.
0.4268.6PtpAffx.37729.1.A1_atCV241217--4e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)S.X.H.G.
0.3964.6PtpAffx.147259.1.A1_atCV243754hypothetical protein-1e-1At1g80170polygalacturonase, putative / pectinase, putativeS.X.H.G.
0.3661.6PtpAffx.208321.1.S1_atpmrna16545hypothetical protein-4e-40At1g24120ARL1 (ARG1-LIKE 1)S.X.H.G.
0.3052.0PtpAffx.127897.1.A1_atCV240494hypothetical protein-3e+0At5g53486unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.699.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
9.898.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
5.997.4GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
5.897.4GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
4.495.9GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.651e-77289PtpAffx.114181.1.A1_atCV268152--3e+0At2g31570ATGPX2 (GLUTATHIONE PEROXIDASE 2)C.G.S.X.
0.053e-56218PtpAffx.211342.1.S1_atpmrna22234hypothetical protein-1e-2At5g60490FLA12C.G.S.X.
0.053e-56218PtpAffx.211342.1.S1_x_atpmrna22234hypothetical protein-1e-2At5g60490FLA12C.G.S.X.
0.367e-48190PtpAffx.92772.2.S1_atDN495937hypothetical protein-5e+0At5g02080DNA/panthothenate metabolism flavoprotein family proteinC.G.S.X.
0.381e-37157PtpAffx.54755.1.S1_atDN498989--3e+0At5g28885unknown proteinC.G.S.X.
0.296e-30131PtpAffx.11691.1.S1_atCV256480hypothetical protein-7e+0At5g33210SRS8 (SHI-RELATED SEQUENCE 8)C.G.S.X.
0.163e-1375PtpAffx.94932.1.A1_atCV266150--3e-1At5g18820EMB3007 (embryo defective 3007)C.G.S.X.
0.051e-654PtpAffx.225287.1.S1_x_atpmrna44528hypothetical protein-4e-1At5g11130exostosin family proteinC.G.S.X.
0.051e-654PtpAffx.225287.1.S1_atpmrna44528hypothetical protein-4e-1At5g11130exostosin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-134Arabidopsis thalianaAt2g309333767975-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO---C.G.S.X.
0.041e+034Glycine maxGma.16952.1.A1_atAW310236--8e-4At5g08080SYP132 (SYNTAXIN OF PLANTS 132)C.G.S.X.
0.061e+032Hordeum vulgareHV_CEb0003O01r2_x_atHV_CEb0003O01r2--3e-1At5g40382cytochrome-c oxidaseC.G.S.X.
0.051e+034Oryza sativaOsAffx.5622.1.S1_at---0C.G.S.X.
0.051e+130Triticum aestivumTaAffx.83818.1.S1_atCA650417--2e-1At1g66560WRKY64C.G.S.X.
0.042e-134Vitis vinifera1607388_atCF204480.1--3e-26At5g23750remorin family proteinC.G.S.X.
0.041e+032Zea maysZmAffx.201.1.A1_atAI670148--3e+0At2g27740unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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