Gene omics information

Query gene ID PtpAffx.114748.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.114748.1.A1_atCV245313hypothetical protein-3e-14At5g42720glycosyl hydrolase family 17 proteinS.X.H.G.
0.6791.1PtpAffx.212088.1.S1_s_atpmrna23715DNA methyltransferase /// DNA methyltransferase-3e-49At5g49160MET1 (METHYLTRANSFERASE 1)S.X.H.G.
0.6086.0PtpAffx.212088.1.S1_atpmrna23715DNA methyltransferase-3e-49At5g49160MET1 (METHYLTRANSFERASE 1)S.X.H.G.
0.5380.5Ptp.2607.2.S1_a_atBU894129hypothetical protein-1e+0At2g03850late embryogenesis abundant domain-containing protein / LEA domain-containing proteinS.X.H.G.
0.4471.9PtpAffx.208817.1.S1_atpmrna17485hypothetical protein-9e-26At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)S.X.H.G.
0.1423.5Ptp.3295.1.S1_atBU813448hypothetical protein-1e-3At3g05545transcription factor, putative / zinc finger (C3HC4 type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.4100.0GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
9.398.8GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
7.398.2GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
7.398.2GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
6.697.9GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
1.583.5GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
1.381.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.282e-136486Ptp.2728.1.S1_atCV241162hypothetical protein-5e-14At5g42720glycosyl hydrolase family 17 proteinC.G.S.X.
0.352e-124446PtpAffx.5999.1.S1_s_atBU894039hypothetical protein-3e-14At5g42720glycosyl hydrolase family 17 proteinC.G.S.X.
0.235e-54212PtpAffx.216210.1.S1_atpmrna30856hypothetical protein-7e-2At2g30920ATCOQ3 (ARABDIOPSIS THALIANA COENZYME Q 3)C.G.S.X.
0.303e-43176PtpAffx.217182.1.S1_atpmrna32338hypothetical protein-1e-1At5g63225-C.G.S.X.
0.311e-26121PtpAffx.23037.1.A1_atCV232626--2e-7At4g34480catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.302e-22107PtpAffx.224410.1.S1_atpmrna42909hypothetical protein-3e-3At4g34480catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.272e-1997PtpAffx.135403.1.S1_s_atBU893525hypothetical protein-6e-4At4g34480catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.351e-1791Ptp.4747.1.A1_x_atCV267614--2e-3At4g34480catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.351e-1791Ptp.4747.1.A1_s_atCV267614hypothetical protein-2e-3At4g34480catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.093e-1479Arabidopsis thalianaAt5g42720834281glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFO---C.G.S.X.
0.142e-448Glycine maxGma.17299.2.S1_atBG237465--5e+0At2g22290ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D)C.G.S.X.
0.031e-240Hordeum vulgareContig16187_atContig16187--6e-3At2g27500glycosyl hydrolase family 17 proteinC.G.S.X.
0.024e+034Oryza sativaOsAffx.8235.1.S1_x_at---0C.G.S.X.
0.035e-136Triticum aestivumTaAffx.59789.1.S1_atCA595294--3e-13At3g13560glycosyl hydrolase family 17 proteinC.G.S.X.
0.287e-1993Vitis vinifera1616183_atCF405742hypothetical protein LOC100257468-3e-1At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)C.G.S.X.
0.028e-134Zea maysZmAffx.1430.1.S1_at11990232-15--3e-57Atcg00160-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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